Fecobiome Initiative | Resources

Run accession	Bioproject	Sample type	Data type	Location	Farm name	Farm size	Animal	Antibiotics	Host	Age in months	Diet	FBP detected	Target region 16S	Number of samples	Number of animals	Sample date	Publication
ERR3393558		individual	shotgun	Korea	A	100	lactating cows		uniq1245	62.0	cow diet			None	None	March 24, 1900	Lim SK et al. (2020): Antibiotic resistomes discovered in the gut microbiomes of Korean swine and cattle
ERR3393565		individual	shotgun	Korea	A	100	M		uniq1246	19.0	steer-concentrate			None	None	March 24, 1900	Lim SK et al. (2020): Antibiotic resistomes discovered in the gut microbiomes of Korean swine and cattle
ERR3393574		individual	shotgun	Korea	A	100	M		uniq1247	18.0	steer-concentrate			None	None	March 24, 1900	Lim SK et al. (2020): Antibiotic resistomes discovered in the gut microbiomes of Korean swine and cattle
ERR3393549		individual	shotgun	Korea	B	106	M		uniq1248	22.0	steer-concentrate			None	None	March 24, 1900	Lim SK et al. (2020): Antibiotic resistomes discovered in the gut microbiomes of Korean swine and cattle
ERR3393553		individual	shotgun	Korea	B	106	M		uniq1249	24.0	steer-concentrate			None	None	March 24, 1900	Lim SK et al. (2020): Antibiotic resistomes discovered in the gut microbiomes of Korean swine and cattle
ERR3393557		individual	shotgun	Korea	B	106	M		uniq1250	25.0	steer-concentrate			None	None	March 24, 1900	Lim SK et al. (2020): Antibiotic resistomes discovered in the gut microbiomes of Korean swine and cattle
ERR3393559		individual	shotgun	Korea	C	162	lactating cows		uniq1251	42.0	cow diet			None	None	March 24, 1900	Lim SK et al. (2020): Antibiotic resistomes discovered in the gut microbiomes of Korean swine and cattle
ERR3393560		individual	shotgun	Korea	C	162	lactating cows		uniq1252	69.0	cow diet			None	None	March 24, 1900	Lim SK et al. (2020): Antibiotic resistomes discovered in the gut microbiomes of Korean swine and cattle
ERR3393561		individual	shotgun	Korea	C	162	lactating cows		uniq1253	36.0	cow diet			None	None	March 24, 1900	Lim SK et al. (2020): Antibiotic resistomes discovered in the gut microbiomes of Korean swine and cattle
ERR3393562		individual	shotgun	Korea	D	130	lactating cows		uniq1254	30.0	cow diet			None	None	March 24, 1900	Lim SK et al. (2020): Antibiotic resistomes discovered in the gut microbiomes of Korean swine and cattle
ERR3393563		individual	shotgun	Korea	D	130	lactating cows		uniq1255	40.0	cow diet			None	None	March 24, 1900	Lim SK et al. (2020): Antibiotic resistomes discovered in the gut microbiomes of Korean swine and cattle
ERR3393564		individual	shotgun	Korea	D	130	lactating cows		uniq1256	60.0	cow diet			None	None	March 24, 1900	Lim SK et al. (2020): Antibiotic resistomes discovered in the gut microbiomes of Korean swine and cattle
ERR3393566		individual	shotgun	Korea	E	35	lactating cows		uniq1257	25.0	cow diet			None	None	March 24, 1900	Lim SK et al. (2020): Antibiotic resistomes discovered in the gut microbiomes of Korean swine and cattle
ERR3393567		individual	shotgun	Korea	E	35	M		uniq1258	45.0	steer-concentrate			None	None	March 24, 1900	Lim SK et al. (2020): Antibiotic resistomes discovered in the gut microbiomes of Korean swine and cattle
ERR3393568		individual	shotgun	Korea	E	35	M		uniq1259	48.0	steer-concentrate			None	None	March 24, 1900	Lim SK et al. (2020): Antibiotic resistomes discovered in the gut microbiomes of Korean swine and cattle
ERR3393569		individual	shotgun	Korea	E	35			uniq1260	None				None	None	March 24, 1900	Lim SK et al. (2020): Antibiotic resistomes discovered in the gut microbiomes of Korean swine and cattle
ERR3393570		individual	shotgun	Korea	F	350	lactating cows		uniq1261	25.0	cow diet			None	None	March 24, 1900	Lim SK et al. (2020): Antibiotic resistomes discovered in the gut microbiomes of Korean swine and cattle
ERR3393571		individual	shotgun	Korea	F	350	lactating cows		uniq1262	25.0	cow diet			None	None	March 24, 1900	Lim SK et al. (2020): Antibiotic resistomes discovered in the gut microbiomes of Korean swine and cattle
ERR3393572		individual	shotgun	Korea	F	350	lactating cows		uniq1263	22.0	cow diet			None	None	March 24, 1900	Lim SK et al. (2020): Antibiotic resistomes discovered in the gut microbiomes of Korean swine and cattle
ERR3393573		individual	shotgun	Korea	G	198	lactating cows		uniq1264	26.0	cow diet			None	None	March 24, 1900	Lim SK et al. (2020): Antibiotic resistomes discovered in the gut microbiomes of Korean swine and cattle
ERR3393575		individual	shotgun	Korea	G	198	M		uniq1265	25.0	steer-concentrate			None	None	March 24, 1900	Lim SK et al. (2020): Antibiotic resistomes discovered in the gut microbiomes of Korean swine and cattle
ERR3393576		individual	shotgun	Korea	G	198	M		uniq1266	24.0	steer-concentrate			None	None	March 24, 1900	Lim SK et al. (2020): Antibiotic resistomes discovered in the gut microbiomes of Korean swine and cattle
ERR3393577		individual	shotgun	Korea	G	198			uniq1267	None				None	None	March 24, 1900	Lim SK et al. (2020): Antibiotic resistomes discovered in the gut microbiomes of Korean swine and cattle
ERR3393578		individual	shotgun	Korea	H	40	lactating cows		uniq1268	50.0	cow diet			None	None	March 24, 1900	Lim SK et al. (2020): Antibiotic resistomes discovered in the gut microbiomes of Korean swine and cattle
ERR3393579		individual	shotgun	Korea	H	40	lactating cows		uniq1269	90.0	cow diet			None	None	March 24, 1900	Lim SK et al. (2020): Antibiotic resistomes discovered in the gut microbiomes of Korean swine and cattle
ERR3393580		individual	shotgun	Korea	H	40	lactating cows		uniq1270	70.0	cow diet			None	None	March 24, 1900	Lim SK et al. (2020): Antibiotic resistomes discovered in the gut microbiomes of Korean swine and cattle
ERR3393581		individual	shotgun	Korea	I	350	lactating cows		uniq1271	22.0	cow diet			None	None	March 24, 1900	Lim SK et al. (2020): Antibiotic resistomes discovered in the gut microbiomes of Korean swine and cattle
ERR3393582		individual	shotgun	Korea	I	350	M		uniq1272	23.0	steer-concentrate			None	None	March 24, 1900	Lim SK et al. (2020): Antibiotic resistomes discovered in the gut microbiomes of Korean swine and cattle
ERR3393583		individual	shotgun	Korea	I	350	M		uniq1273	27.0	steer-concentrate			None	None	March 24, 1900	Lim SK et al. (2020): Antibiotic resistomes discovered in the gut microbiomes of Korean swine and cattle
ERR3393584		individual	shotgun	Korea	J	98	M		uniq1274	23.0	steer-concentrate			None	None	March 24, 1900	Lim SK et al. (2020): Antibiotic resistomes discovered in the gut microbiomes of Korean swine and cattle
ERR3393585		individual	shotgun	Korea	J	98	M		uniq1275	28.0	steer-concentrate			None	None	March 24, 1900	Lim SK et al. (2020): Antibiotic resistomes discovered in the gut microbiomes of Korean swine and cattle
ERR3393586		individual	shotgun	Korea	J	98	M		uniq1276	28.0	steer-concentrate			None	None	March 24, 1900	Lim SK et al. (2020): Antibiotic resistomes discovered in the gut microbiomes of Korean swine and cattle
ERR3393546		individual	shotgun	Korea	K	109	M		uniq1277	27.0	steer-concentrate			None	None	March 24, 1900	Lim SK et al. (2020): Antibiotic resistomes discovered in the gut microbiomes of Korean swine and cattle
ERR3393547		individual	shotgun	Korea	K	109	M		uniq1278	27.0	steer-concentrate			None	None	March 24, 1900	Lim SK et al. (2020): Antibiotic resistomes discovered in the gut microbiomes of Korean swine and cattle
ERR3393548		individual	shotgun	Korea	K	109	M		uniq1279	29.0	steer-concentrate			None	None	March 24, 1900	Lim SK et al. (2020): Antibiotic resistomes discovered in the gut microbiomes of Korean swine and cattle
ERR3393550		individual	shotgun	Korea	L	93	M		uniq1280	27.0	steer-concentrate			None	None	March 24, 1900	Lim SK et al. (2020): Antibiotic resistomes discovered in the gut microbiomes of Korean swine and cattle
ERR3393551		individual	shotgun	Korea	L	93	M		uniq1281	29.0	steer-concentrate			None	None	March 24, 1900	Lim SK et al. (2020): Antibiotic resistomes discovered in the gut microbiomes of Korean swine and cattle
ERR3393552		individual	shotgun	Korea	L	93	M		uniq1282	33.0	steer-concentrate			None	None	March 24, 1900	Lim SK et al. (2020): Antibiotic resistomes discovered in the gut microbiomes of Korean swine and cattle
ERR3393554		individual	shotgun	Korea	M	15	M		uniq1283	31.0	steer-concentrate			None	None	March 24, 1900	Lim SK et al. (2020): Antibiotic resistomes discovered in the gut microbiomes of Korean swine and cattle
ERR3393555		individual	shotgun	Korea	M	15	M		uniq1284	30.0	steer-concentrate			None	None	March 24, 1900	Lim SK et al. (2020): Antibiotic resistomes discovered in the gut microbiomes of Korean swine and cattle
ERR3393556		individual	shotgun	Korea	M	15	M		uniq1285	32.0	steer-concentrate			None	None	March 24, 1900	Lim SK et al. (2020): Antibiotic resistomes discovered in the gut microbiomes of Korean swine and cattle
SRR7686592		individual	shotgun	Pennsylvania, US		None	lactating cows			None	cow diet			None	None	None	Serajus Salaheen et al. (2019): Metagenomic analysis of the fecal microbiomes from Escherichia coli O157:H7-shedding and non-shedding cows on a single dairy farm
SRR7686593		individual	shotgun	Pennsylvania, US		None	lactating cows			None	cow diet			None	None	None	Serajus Salaheen et al. (2019): Metagenomic analysis of the fecal microbiomes from Escherichia coli O157:H7-shedding and non-shedding cows on a single dairy farm
SRR7686594		individual	shotgun	Pennsylvania, US		None	lactating cows			None	cow diet			None	None	None	Serajus Salaheen et al. (2019): Metagenomic analysis of the fecal microbiomes from Escherichia coli O157:H7-shedding and non-shedding cows on a single dairy farm
SRR7686595		individual	shotgun	Pennsylvania, US		None	lactating cows			None	cow diet			None	None	None	Serajus Salaheen et al. (2019): Metagenomic analysis of the fecal microbiomes from Escherichia coli O157:H7-shedding and non-shedding cows on a single dairy farm
SRR7686596		individual	shotgun	Pennsylvania, US		None	lactating cows			None	cow diet			None	None	None	Serajus Salaheen et al. (2019): Metagenomic analysis of the fecal microbiomes from Escherichia coli O157:H7-shedding and non-shedding cows on a single dairy farm
SRR7686597		individual	shotgun	Pennsylvania, US		None	lactating cows			None	cow diet			None	None	None	Serajus Salaheen et al. (2019): Metagenomic analysis of the fecal microbiomes from Escherichia coli O157:H7-shedding and non-shedding cows on a single dairy farm
SRR7686598		individual	shotgun	Pennsylvania, US		None	lactating cows		uniq1292	None	cow diet			None	None	None	Serajus Salaheen et al. (2019): Metagenomic analysis of the fecal microbiomes from Escherichia coli O157:H7-shedding and non-shedding cows on a single dairy farm
SRR7686599		individual	shotgun	Pennsylvania, US		None	lactating cows		uniq1293	None	cow diet			None	None	None	Serajus Salaheen et al. (2019): Metagenomic analysis of the fecal microbiomes from Escherichia coli O157:H7-shedding and non-shedding cows on a single dairy farm
SRR7686600		individual	shotgun	Pennsylvania, US		None	lactating cows			None	cow diet			None	None	None	Serajus Salaheen et al. (2019): Metagenomic analysis of the fecal microbiomes from Escherichia coli O157:H7-shedding and non-shedding cows on a single dairy farm
SRR7686601		individual	shotgun	Pennsylvania, US		None	lactating cows		uniq1295	None	cow diet			None	None	None	Serajus Salaheen et al. (2019): Metagenomic analysis of the fecal microbiomes from Escherichia coli O157:H7-shedding and non-shedding cows on a single dairy farm
SRR7686602		individual	shotgun	Pennsylvania, US		None	lactating cows		uniq1296	None	cow diet			None	None	None	Serajus Salaheen et al. (2019): Metagenomic analysis of the fecal microbiomes from Escherichia coli O157:H7-shedding and non-shedding cows on a single dairy farm
SRR7686603		individual	shotgun	Pennsylvania, US		None	lactating cows			None	cow diet			None	None	None	Serajus Salaheen et al. (2019): Metagenomic analysis of the fecal microbiomes from Escherichia coli O157:H7-shedding and non-shedding cows on a single dairy farm
SRR7686604		individual	shotgun	Pennsylvania, US		None	lactating cows			None	cow diet			None	None	None	Serajus Salaheen et al. (2019): Metagenomic analysis of the fecal microbiomes from Escherichia coli O157:H7-shedding and non-shedding cows on a single dairy farm
SRR7686605		individual	shotgun	Pennsylvania, US		None	lactating cows			None	cow diet			None	None	None	Serajus Salaheen et al. (2019): Metagenomic analysis of the fecal microbiomes from Escherichia coli O157:H7-shedding and non-shedding cows on a single dairy farm
SRR3181106		individual	shotgun	Texas, US		None	lees than 2yo steer		11	18.0	corn-based			None	None	None	Doster E et al. (2018): Investigating Effects of Tulathromycin Metaphylaxis on the Fecal Resistome and Microbiome of Commercial Feedlot Cattle Early in the Feeding Period
SRR3185498		individual	shotgun	Texas, US		None	lees than 2yo steer		11	18.0	corn-based			None	None	None	Doster E et al. (2018): Investigating Effects of Tulathromycin Metaphylaxis on the Fecal Resistome and Microbiome of Commercial Feedlot Cattle Early in the Feeding Period
SRR3181136		individual	shotgun	Texas, US		None	lees than 2yo steer	tulathromycin injection	11	18.0	corn-based			None	None	None	Doster E et al. (2018): Investigating Effects of Tulathromycin Metaphylaxis on the Fecal Resistome and Microbiome of Commercial Feedlot Cattle Early in the Feeding Period
SRR3181107		individual	shotgun	Texas, US		None	lees than 2yo steer		37	18.0	corn-based			None	None	None	Doster E et al. (2018): Investigating Effects of Tulathromycin Metaphylaxis on the Fecal Resistome and Microbiome of Commercial Feedlot Cattle Early in the Feeding Period
SRR3181137		individual	shotgun	Texas, US		None	lees than 2yo steer	tulathromycin injection	37	18.0	corn-based			None	None	None	Doster E et al. (2018): Investigating Effects of Tulathromycin Metaphylaxis on the Fecal Resistome and Microbiome of Commercial Feedlot Cattle Early in the Feeding Period
SRR3181108		individual	shotgun	Texas, US		None	lees than 2yo steer		51	18.0	corn-based			None	None	None	Doster E et al. (2018): Investigating Effects of Tulathromycin Metaphylaxis on the Fecal Resistome and Microbiome of Commercial Feedlot Cattle Early in the Feeding Period
SRR3181138		individual	shotgun	Texas, US		None	lees than 2yo steer	tulathromycin injection	51	18.0	corn-based			None	None	None	Doster E et al. (2018): Investigating Effects of Tulathromycin Metaphylaxis on the Fecal Resistome and Microbiome of Commercial Feedlot Cattle Early in the Feeding Period
SRR3181109		individual	shotgun	Texas, US		None	lees than 2yo steer		62	18.0	corn-based			None	None	None	Doster E et al. (2018): Investigating Effects of Tulathromycin Metaphylaxis on the Fecal Resistome and Microbiome of Commercial Feedlot Cattle Early in the Feeding Period
SRR3181139		individual	shotgun	Texas, US		None	lees than 2yo steer	tulathromycin injection	62	18.0	corn-based			None	None	None	Doster E et al. (2018): Investigating Effects of Tulathromycin Metaphylaxis on the Fecal Resistome and Microbiome of Commercial Feedlot Cattle Early in the Feeding Period
SRR3181110		individual	shotgun	Texas, US		None	lees than 2yo steer		83	18.0	corn-based			None	None	None	Doster E et al. (2018): Investigating Effects of Tulathromycin Metaphylaxis on the Fecal Resistome and Microbiome of Commercial Feedlot Cattle Early in the Feeding Period
SRR3181140		individual	shotgun	Texas, US		None	lees than 2yo steer	tulathromycin injection	83	18.0	corn-based			None	None	None	Doster E et al. (2018): Investigating Effects of Tulathromycin Metaphylaxis on the Fecal Resistome and Microbiome of Commercial Feedlot Cattle Early in the Feeding Period
SRR3181111		individual	shotgun	Texas, US		None	lees than 2yo steer		84	18.0	corn-based			None	None	None	Doster E et al. (2018): Investigating Effects of Tulathromycin Metaphylaxis on the Fecal Resistome and Microbiome of Commercial Feedlot Cattle Early in the Feeding Period
SRR3181141		individual	shotgun	Texas, US		None	lees than 2yo steer	tulathromycin injection	84	18.0	corn-based			None	None	None	Doster E et al. (2018): Investigating Effects of Tulathromycin Metaphylaxis on the Fecal Resistome and Microbiome of Commercial Feedlot Cattle Early in the Feeding Period
SRR3181112		individual	shotgun	Texas, US		None	lees than 2yo steer		92	18.0	corn-based			None	None	None	Doster E et al. (2018): Investigating Effects of Tulathromycin Metaphylaxis on the Fecal Resistome and Microbiome of Commercial Feedlot Cattle Early in the Feeding Period
SRR3181142		individual	shotgun	Texas, US		None	lees than 2yo steer	tulathromycin injection	92	18.0	corn-based			None	None	None	Doster E et al. (2018): Investigating Effects of Tulathromycin Metaphylaxis on the Fecal Resistome and Microbiome of Commercial Feedlot Cattle Early in the Feeding Period
SRR3181113		individual	shotgun	Texas, US		None	lees than 2yo steer		93	18.0	corn-based			None	None	None	Doster E et al. (2018): Investigating Effects of Tulathromycin Metaphylaxis on the Fecal Resistome and Microbiome of Commercial Feedlot Cattle Early in the Feeding Period
SRR3181143		individual	shotgun	Texas, US		None	lees than 2yo steer	tulathromycin injection	93	18.0	corn-based			None	None	None	Doster E et al. (2018): Investigating Effects of Tulathromycin Metaphylaxis on the Fecal Resistome and Microbiome of Commercial Feedlot Cattle Early in the Feeding Period
SRR3181114		individual	shotgun	Texas, US		None	lees than 2yo steer		102	18.0	corn-based			None	None	None	Doster E et al. (2018): Investigating Effects of Tulathromycin Metaphylaxis on the Fecal Resistome and Microbiome of Commercial Feedlot Cattle Early in the Feeding Period
SRR3181144		individual	shotgun	Texas, US		None	lees than 2yo steer	tulathromycin injection	102	18.0	corn-based			None	None	None	Doster E et al. (2018): Investigating Effects of Tulathromycin Metaphylaxis on the Fecal Resistome and Microbiome of Commercial Feedlot Cattle Early in the Feeding Period
SRR3181115		individual	shotgun	Texas, US		None	lees than 2yo steer		103	18.0	corn-based			None	None	None	Doster E et al. (2018): Investigating Effects of Tulathromycin Metaphylaxis on the Fecal Resistome and Microbiome of Commercial Feedlot Cattle Early in the Feeding Period
SRR3181145		individual	shotgun	Texas, US		None	lees than 2yo steer	tulathromycin injection	103	18.0	corn-based			None	None	None	Doster E et al. (2018): Investigating Effects of Tulathromycin Metaphylaxis on the Fecal Resistome and Microbiome of Commercial Feedlot Cattle Early in the Feeding Period
SRR3181116		individual	shotgun	Texas, US		None	lees than 2yo steer		130	18.0	corn-based			None	None	None	Doster E et al. (2018): Investigating Effects of Tulathromycin Metaphylaxis on the Fecal Resistome and Microbiome of Commercial Feedlot Cattle Early in the Feeding Period
SRR3181146		individual	shotgun	Texas, US		None	lees than 2yo steer	tulathromycin injection	130	18.0	corn-based			None	None	None	Doster E et al. (2018): Investigating Effects of Tulathromycin Metaphylaxis on the Fecal Resistome and Microbiome of Commercial Feedlot Cattle Early in the Feeding Period
SRR3181117		individual	shotgun	Texas, US		None	lees than 2yo steer		155	18.0	corn-based			None	None	None	Doster E et al. (2018): Investigating Effects of Tulathromycin Metaphylaxis on the Fecal Resistome and Microbiome of Commercial Feedlot Cattle Early in the Feeding Period
SRR3181147		individual	shotgun	Texas, US		None	lees than 2yo steer	tulathromycin injection	155	18.0	corn-based			None	None	None	Doster E et al. (2018): Investigating Effects of Tulathromycin Metaphylaxis on the Fecal Resistome and Microbiome of Commercial Feedlot Cattle Early in the Feeding Period
SRR3181118		individual	shotgun	Texas, US		None	lees than 2yo steer		156	18.0	corn-based			None	None	None	Doster E et al. (2018): Investigating Effects of Tulathromycin Metaphylaxis on the Fecal Resistome and Microbiome of Commercial Feedlot Cattle Early in the Feeding Period
SRR3181148		individual	shotgun	Texas, US		None	lees than 2yo steer	tulathromycin injection	156	18.0	corn-based			None	None	None	Doster E et al. (2018): Investigating Effects of Tulathromycin Metaphylaxis on the Fecal Resistome and Microbiome of Commercial Feedlot Cattle Early in the Feeding Period
SRR3181119		individual	shotgun	Texas, US		None	lees than 2yo steer		158	18.0	corn-based			None	None	None	Doster E et al. (2018): Investigating Effects of Tulathromycin Metaphylaxis on the Fecal Resistome and Microbiome of Commercial Feedlot Cattle Early in the Feeding Period
SRR3181149		individual	shotgun	Texas, US		None	lees than 2yo steer	tulathromycin injection	158	18.0	corn-based			None	None	None	Doster E et al. (2018): Investigating Effects of Tulathromycin Metaphylaxis on the Fecal Resistome and Microbiome of Commercial Feedlot Cattle Early in the Feeding Period
SRR3181120		individual	shotgun	Texas, US		None	lees than 2yo steer		164	18.0	corn-based			None	None	None	Doster E et al. (2018): Investigating Effects of Tulathromycin Metaphylaxis on the Fecal Resistome and Microbiome of Commercial Feedlot Cattle Early in the Feeding Period
SRR3181150		individual	shotgun	Texas, US		None	lees than 2yo steer	tulathromycin injection	164	18.0	corn-based			None	None	None	Doster E et al. (2018): Investigating Effects of Tulathromycin Metaphylaxis on the Fecal Resistome and Microbiome of Commercial Feedlot Cattle Early in the Feeding Period
SRR3181121		individual	shotgun	Texas, US		None	lees than 2yo steer		208	18.0	corn-based			None	None	None	Doster E et al. (2018): Investigating Effects of Tulathromycin Metaphylaxis on the Fecal Resistome and Microbiome of Commercial Feedlot Cattle Early in the Feeding Period
SRR3181151		individual	shotgun	Texas, US		None	lees than 2yo steer		208	18.0	corn-based			None	None	None	Doster E et al. (2018): Investigating Effects of Tulathromycin Metaphylaxis on the Fecal Resistome and Microbiome of Commercial Feedlot Cattle Early in the Feeding Period
SRR3181122		individual	shotgun	Texas, US		None	lees than 2yo steer		216	18.0	corn-based			None	None	None	Doster E et al. (2018): Investigating Effects of Tulathromycin Metaphylaxis on the Fecal Resistome and Microbiome of Commercial Feedlot Cattle Early in the Feeding Period
SRR3181152		individual	shotgun	Texas, US		None	lees than 2yo steer		216	18.0	corn-based			None	None	None	Doster E et al. (2018): Investigating Effects of Tulathromycin Metaphylaxis on the Fecal Resistome and Microbiome of Commercial Feedlot Cattle Early in the Feeding Period
SRR3181123		individual	shotgun	Texas, US		None	lees than 2yo steer		220	18.0	corn-based			None	None	None	Doster E et al. (2018): Investigating Effects of Tulathromycin Metaphylaxis on the Fecal Resistome and Microbiome of Commercial Feedlot Cattle Early in the Feeding Period
SRR3181153		individual	shotgun	Texas, US		None	lees than 2yo steer		220	18.0	corn-based			None	None	None	Doster E et al. (2018): Investigating Effects of Tulathromycin Metaphylaxis on the Fecal Resistome and Microbiome of Commercial Feedlot Cattle Early in the Feeding Period
SRR3181124		individual	shotgun	Texas, US		None	lees than 2yo steer		227	18.0	corn-based			None	None	None	Doster E et al. (2018): Investigating Effects of Tulathromycin Metaphylaxis on the Fecal Resistome and Microbiome of Commercial Feedlot Cattle Early in the Feeding Period
SRR3181154		individual	shotgun	Texas, US		None	lees than 2yo steer		227	18.0	corn-based			None	None	None	Doster E et al. (2018): Investigating Effects of Tulathromycin Metaphylaxis on the Fecal Resistome and Microbiome of Commercial Feedlot Cattle Early in the Feeding Period
SRR3181125		individual	shotgun	Texas, US		None	lees than 2yo steer		228	18.0	corn-based			None	None	None	Doster E et al. (2018): Investigating Effects of Tulathromycin Metaphylaxis on the Fecal Resistome and Microbiome of Commercial Feedlot Cattle Early in the Feeding Period
SRR3181155		individual	shotgun	Texas, US		None	lees than 2yo steer		228	18.0	corn-based			None	None	None	Doster E et al. (2018): Investigating Effects of Tulathromycin Metaphylaxis on the Fecal Resistome and Microbiome of Commercial Feedlot Cattle Early in the Feeding Period
SRR3181126		individual	shotgun	Texas, US		None	lees than 2yo steer		261	18.0	corn-based			None	None	None	Doster E et al. (2018): Investigating Effects of Tulathromycin Metaphylaxis on the Fecal Resistome and Microbiome of Commercial Feedlot Cattle Early in the Feeding Period
SRR3181156		individual	shotgun	Texas, US		None	lees than 2yo steer		261	18.0	corn-based			None	None	None	Doster E et al. (2018): Investigating Effects of Tulathromycin Metaphylaxis on the Fecal Resistome and Microbiome of Commercial Feedlot Cattle Early in the Feeding Period
SRR3181127		individual	shotgun	Texas, US		None	lees than 2yo steer		281	18.0	corn-based			None	None	None	Doster E et al. (2018): Investigating Effects of Tulathromycin Metaphylaxis on the Fecal Resistome and Microbiome of Commercial Feedlot Cattle Early in the Feeding Period
SRR3181157		individual	shotgun	Texas, US		None	lees than 2yo steer		281	18.0	corn-based			None	None	None	Doster E et al. (2018): Investigating Effects of Tulathromycin Metaphylaxis on the Fecal Resistome and Microbiome of Commercial Feedlot Cattle Early in the Feeding Period
SRR3181128		individual	shotgun	Texas, US		None	lees than 2yo steer		285	18.0	corn-based			None	None	None	Doster E et al. (2018): Investigating Effects of Tulathromycin Metaphylaxis on the Fecal Resistome and Microbiome of Commercial Feedlot Cattle Early in the Feeding Period
SRR3181158		individual	shotgun	Texas, US		None	lees than 2yo steer		285	18.0	corn-based			None	None	None	Doster E et al. (2018): Investigating Effects of Tulathromycin Metaphylaxis on the Fecal Resistome and Microbiome of Commercial Feedlot Cattle Early in the Feeding Period
SRR3181129		individual	shotgun	Texas, US		None	lees than 2yo steer		286	18.0	corn-based			None	None	None	Doster E et al. (2018): Investigating Effects of Tulathromycin Metaphylaxis on the Fecal Resistome and Microbiome of Commercial Feedlot Cattle Early in the Feeding Period
SRR3181159		individual	shotgun	Texas, US		None	lees than 2yo steer		286	18.0	corn-based			None	None	None	Doster E et al. (2018): Investigating Effects of Tulathromycin Metaphylaxis on the Fecal Resistome and Microbiome of Commercial Feedlot Cattle Early in the Feeding Period
SRR3181130		individual	shotgun	Texas, US		None	lees than 2yo steer		287	18.0	corn-based			None	None	None	Doster E et al. (2018): Investigating Effects of Tulathromycin Metaphylaxis on the Fecal Resistome and Microbiome of Commercial Feedlot Cattle Early in the Feeding Period
SRR3181160		individual	shotgun	Texas, US		None	lees than 2yo steer		287	18.0	corn-based			None	None	None	Doster E et al. (2018): Investigating Effects of Tulathromycin Metaphylaxis on the Fecal Resistome and Microbiome of Commercial Feedlot Cattle Early in the Feeding Period
SRR3181131		individual	shotgun	Texas, US		None	lees than 2yo steer		289	18.0	corn-based			None	None	None	Doster E et al. (2018): Investigating Effects of Tulathromycin Metaphylaxis on the Fecal Resistome and Microbiome of Commercial Feedlot Cattle Early in the Feeding Period
SRR3181161		individual	shotgun	Texas, US		None	lees than 2yo steer		289	18.0	corn-based			None	None	None	Doster E et al. (2018): Investigating Effects of Tulathromycin Metaphylaxis on the Fecal Resistome and Microbiome of Commercial Feedlot Cattle Early in the Feeding Period
SRR3181132		individual	shotgun	Texas, US		None	lees than 2yo steer		298	18.0	corn-based			None	None	None	Doster E et al. (2018): Investigating Effects of Tulathromycin Metaphylaxis on the Fecal Resistome and Microbiome of Commercial Feedlot Cattle Early in the Feeding Period
SRR3181162		individual	shotgun	Texas, US		None	lees than 2yo steer		298	18.0	corn-based			None	None	None	Doster E et al. (2018): Investigating Effects of Tulathromycin Metaphylaxis on the Fecal Resistome and Microbiome of Commercial Feedlot Cattle Early in the Feeding Period
SRR3181133		individual	shotgun	Texas, US		None	lees than 2yo steer		349	18.0	corn-based			None	None	None	Doster E et al. (2018): Investigating Effects of Tulathromycin Metaphylaxis on the Fecal Resistome and Microbiome of Commercial Feedlot Cattle Early in the Feeding Period
SRR3181163		individual	shotgun	Texas, US		None	lees than 2yo steer		349	18.0	corn-based			None	None	None	Doster E et al. (2018): Investigating Effects of Tulathromycin Metaphylaxis on the Fecal Resistome and Microbiome of Commercial Feedlot Cattle Early in the Feeding Period
SRR3181134		individual	shotgun	Texas, US		None	lees than 2yo steer		372	18.0	corn-based			None	None	None	Doster E et al. (2018): Investigating Effects of Tulathromycin Metaphylaxis on the Fecal Resistome and Microbiome of Commercial Feedlot Cattle Early in the Feeding Period
SRR3181164		individual	shotgun	Texas, US		None	lees than 2yo steer		372	18.0	corn-based			None	None	None	Doster E et al. (2018): Investigating Effects of Tulathromycin Metaphylaxis on the Fecal Resistome and Microbiome of Commercial Feedlot Cattle Early in the Feeding Period
SRR3181135		individual	shotgun	Texas, US		None	lees than 2yo steer		376	18.0	corn-based			None	None	None	Doster E et al. (2018): Investigating Effects of Tulathromycin Metaphylaxis on the Fecal Resistome and Microbiome of Commercial Feedlot Cattle Early in the Feeding Period
SRR3181165		individual	shotgun	Texas, US		None	lees than 2yo steer		376	18.0	corn-based			None	None	None	Doster E et al. (2018): Investigating Effects of Tulathromycin Metaphylaxis on the Fecal Resistome and Microbiome of Commercial Feedlot Cattle Early in the Feeding Period
SRR12217750		individual	shotgun	Pennsylvania, US	A	None	veal			0.05	artificial-milk			None	None	None	Salaheen S et al. (2021): Metagenomic Analysis of the Microbial Communities and Resistomes of Veal Calf Feces
SRR12217749		individual	shotgun	Pennsylvania, US	A	None	veal			0.05	artificial-milk			None	None	None	Salaheen S et al. (2021): Metagenomic Analysis of the Microbial Communities and Resistomes of Veal Calf Feces
SRR12217738		individual	shotgun	Pennsylvania, US	A	None	veal			0.05	artificial-milk			None	None	None	Salaheen S et al. (2021): Metagenomic Analysis of the Microbial Communities and Resistomes of Veal Calf Feces
SRR12217733		individual	shotgun	Pennsylvania, US	B	None	veal			0.05	artificial-milk			None	None	None	Salaheen S et al. (2021): Metagenomic Analysis of the Microbial Communities and Resistomes of Veal Calf Feces
SRR12217732		individual	shotgun	Pennsylvania, US	B	None	veal			0.05	artificial-milk			None	None	None	Salaheen S et al. (2021): Metagenomic Analysis of the Microbial Communities and Resistomes of Veal Calf Feces
SRR12217731		individual	shotgun	Pennsylvania, US	B	None	veal			0.05	artificial-milk			None	None	None	Salaheen S et al. (2021): Metagenomic Analysis of the Microbial Communities and Resistomes of Veal Calf Feces
SRR12217730		individual	shotgun	Pennsylvania, US	H	None	veal			0.05	artificial-milk			None	None	None	Salaheen S et al. (2021): Metagenomic Analysis of the Microbial Communities and Resistomes of Veal Calf Feces
SRR12217729		individual	shotgun	Pennsylvania, US	H	None	veal			0.05	artificial-milk			None	None	None	Salaheen S et al. (2021): Metagenomic Analysis of the Microbial Communities and Resistomes of Veal Calf Feces
SRR12217728		individual	shotgun	Pennsylvania, US	H	None	veal			0.05	artificial-milk			None	None	None	Salaheen S et al. (2021): Metagenomic Analysis of the Microbial Communities and Resistomes of Veal Calf Feces
SRR12217727		individual	shotgun	Pennsylvania, US	M	None	veal			0.05	artificial-milk			None	None	None	Salaheen S et al. (2021): Metagenomic Analysis of the Microbial Communities and Resistomes of Veal Calf Feces
SRR12217748		individual	shotgun	Pennsylvania, US	M	None	veal			0.05	artificial-milk			None	None	None	Salaheen S et al. (2021): Metagenomic Analysis of the Microbial Communities and Resistomes of Veal Calf Feces
SRR12217747		individual	shotgun	Pennsylvania, US	M	None	veal			0.05	artificial-milk			None	None	None	Salaheen S et al. (2021): Metagenomic Analysis of the Microbial Communities and Resistomes of Veal Calf Feces
SRR12217746		individual	shotgun	Pennsylvania, US	A	None	veal			3.0	milk-solid			None	None	None	Salaheen S et al. (2021): Metagenomic Analysis of the Microbial Communities and Resistomes of Veal Calf Feces
SRR12217745		individual	shotgun	Pennsylvania, US	A	None	veal			3.0	milk-solid			None	None	None	Salaheen S et al. (2021): Metagenomic Analysis of the Microbial Communities and Resistomes of Veal Calf Feces
SRR12217744		individual	shotgun	Pennsylvania, US	A	None	veal			3.0	milk-solid			None	None	None	Salaheen S et al. (2021): Metagenomic Analysis of the Microbial Communities and Resistomes of Veal Calf Feces
SRR12217743		individual	shotgun	Pennsylvania, US	B	None	veal			3.0	milk-solid			None	None	None	Salaheen S et al. (2021): Metagenomic Analysis of the Microbial Communities and Resistomes of Veal Calf Feces
SRR12217742		individual	shotgun	Pennsylvania, US	B	None	veal			3.0	milk-solid			None	None	None	Salaheen S et al. (2021): Metagenomic Analysis of the Microbial Communities and Resistomes of Veal Calf Feces
SRR12217741		individual	shotgun	Pennsylvania, US	B	None	veal			3.0	milk-solid			None	None	None	Salaheen S et al. (2021): Metagenomic Analysis of the Microbial Communities and Resistomes of Veal Calf Feces
SRR12217740		individual	shotgun	Pennsylvania, US	H	None	veal			3.0	milk-solid			None	None	None	Salaheen S et al. (2021): Metagenomic Analysis of the Microbial Communities and Resistomes of Veal Calf Feces
SRR12217739		individual	shotgun	Pennsylvania, US	H	None	veal			3.0	milk-solid			None	None	None	Salaheen S et al. (2021): Metagenomic Analysis of the Microbial Communities and Resistomes of Veal Calf Feces
SRR12217737		individual	shotgun	Pennsylvania, US	H	None	veal			3.0	milk-solid			None	None	None	Salaheen S et al. (2021): Metagenomic Analysis of the Microbial Communities and Resistomes of Veal Calf Feces
SRR12217736		individual	shotgun	Pennsylvania, US	M	None	veal			3.0	milk-solid			None	None	None	Salaheen S et al. (2021): Metagenomic Analysis of the Microbial Communities and Resistomes of Veal Calf Feces
SRR12217735		individual	shotgun	Pennsylvania, US	M	None	veal			3.0	milk-solid			None	None	None	Salaheen S et al. (2021): Metagenomic Analysis of the Microbial Communities and Resistomes of Veal Calf Feces
SRR12217734		individual	shotgun	Pennsylvania, US	M	None	veal			3.0	milk-solid			None	None	None	Salaheen S et al. (2021): Metagenomic Analysis of the Microbial Communities and Resistomes of Veal Calf Feces
SRR6512906		composite	shotgun	canada,alberta	Feedlot A	None		antbtcs	multiple	None				None	None	None	Zaheer R et al. (2018): Impact of sequencing depth on the characterization of the microbiome and resistome
SRR6512894		composite	shotgun	canada,alberta	Feedlot A	None		antbtcs	multiple	None				None	None	None	Zaheer R et al. (2018): Impact of sequencing depth on the characterization of the microbiome and resistome
SRR6512891		composite	shotgun	canada,alberta	Feedlot A	None		antbtcs	multiple	None				None	None	None	Zaheer R et al. (2018): Impact of sequencing depth on the characterization of the microbiome and resistome
SRR6512905		composite	shotgun	canada,alberta	Feedlot A	None		antbtcs	multiple	None				None	None	None	Zaheer R et al. (2018): Impact of sequencing depth on the characterization of the microbiome and resistome
SRR6512893		composite	shotgun	canada,alberta	Feedlot A	None		antbtcs	multiple	None				None	None	None	Zaheer R et al. (2018): Impact of sequencing depth on the characterization of the microbiome and resistome
SRR6512892		composite	shotgun	canada,alberta	Feedlot A	None		antbtcs	multiple	None				None	None	None	Zaheer R et al. (2018): Impact of sequencing depth on the characterization of the microbiome and resistome
SRR6512912		composite	shotgun	canada,alberta	Feedlot C	None		antbtcs	multiple	None				None	None	None	Zaheer R et al. (2018): Impact of sequencing depth on the characterization of the microbiome and resistome
SRR6512904		composite	shotgun	canada,alberta	Feedlot C	None		antbtcs	multiple	None				None	None	None	Zaheer R et al. (2018): Impact of sequencing depth on the characterization of the microbiome and resistome
SRR6512896		composite	shotgun	canada,alberta	Feedlot C	None		antbtcs	multiple	None				None	None	None	Zaheer R et al. (2018): Impact of sequencing depth on the characterization of the microbiome and resistome
SRR6512911		composite	shotgun	canada,alberta	Feedlot C	None		antbtcs	multiple	None				None	None	None	Zaheer R et al. (2018): Impact of sequencing depth on the characterization of the microbiome and resistome
SRR6512903		composite	shotgun	canada,alberta	Feedlot C	None		antbtcs	multiple	None				None	None	None	Zaheer R et al. (2018): Impact of sequencing depth on the characterization of the microbiome and resistome
SRR6512895		composite	shotgun	canada,alberta	Feedlot C	None		antbtcs	multiple	None				None	None	None	Zaheer R et al. (2018): Impact of sequencing depth on the characterization of the microbiome and resistome
SRR6512910		composite	shotgun	canada,alberta	Feedlot B	None		antbtcs	multiple	None				None	None	None	Zaheer R et al. (2018): Impact of sequencing depth on the characterization of the microbiome and resistome
SRR6512898		composite	shotgun	canada,alberta	Feedlot B	None		antbtcs	multiple	None				None	None	None	Zaheer R et al. (2018): Impact of sequencing depth on the characterization of the microbiome and resistome
SRR6512902		composite	shotgun	canada,alberta	Feedlot B	None		antbtcs	multiple	None				None	None	None	Zaheer R et al. (2018): Impact of sequencing depth on the characterization of the microbiome and resistome
SRR6512909		composite	shotgun	canada,alberta	Feedlot B	None		antbtcs	multiple	None				None	None	None	Zaheer R et al. (2018): Impact of sequencing depth on the characterization of the microbiome and resistome
SRR6512897		composite	shotgun	canada,alberta	Feedlot B	None		antbtcs	multiple	None				None	None	None	Zaheer R et al. (2018): Impact of sequencing depth on the characterization of the microbiome and resistome
SRR6512901		composite	shotgun	canada,alberta	Feedlot B	None		antbtcs	multiple	None				None	None	None	Zaheer R et al. (2018): Impact of sequencing depth on the characterization of the microbiome and resistome
SRR9037497		composite	shotgun	canada,alberta	Feedlot D	None		no antibiotics	multiple	None				None	None	None	Zaheer R et al. (2018): Impact of sequencing depth on the characterization of the microbiome and resistome
SRR9037496		composite	shotgun	canada,alberta	Feedlot D	None		no antibiotics	multiple	None				None	None	None	Zaheer R et al. (2018): Impact of sequencing depth on the characterization of the microbiome and resistome
SRR6512908		composite	shotgun	canada,alberta	Feedlot D	None		antbtcs	multiple	None				None	None	None	Zaheer R et al. (2018): Impact of sequencing depth on the characterization of the microbiome and resistome
SRR6512900		composite	shotgun	canada,alberta	Feedlot D	None		antbtcs	multiple	None				None	None	None	Zaheer R et al. (2018): Impact of sequencing depth on the characterization of the microbiome and resistome
SRR6512889		composite	shotgun	canada,alberta	Feedlot D	None		antbtcs	multiple	None				None	None	None	Zaheer R et al. (2018): Impact of sequencing depth on the characterization of the microbiome and resistome
SRR9037495		composite	shotgun	canada,alberta	Feedlot D	None		no antibiotics	multiple	None				None	None	None	Zaheer R et al. (2018): Impact of sequencing depth on the characterization of the microbiome and resistome
SRR6512907		composite	shotgun	canada,alberta	Feedlot D	None		antbtcs	multiple	None				None	None	None	Zaheer R et al. (2018): Impact of sequencing depth on the characterization of the microbiome and resistome
SRR6512899		composite	shotgun	canada,alberta	Feedlot D	None		antbtcs	multiple	None				None	None	None	Zaheer R et al. (2018): Impact of sequencing depth on the characterization of the microbiome and resistome
SRR6512890		composite	shotgun	canada,alberta	Feedlot D	None		antbtcs	multiple	None				None	None	None	Zaheer R et al. (2018): Impact of sequencing depth on the characterization of the microbiome and resistome
SRR9037494		composite	shotgun	canada,alberta	Feedlot D	None		antbtcs	multiple	None				None	None	None	Zaheer R et al. (2018): Impact of sequencing depth on the characterization of the microbiome and resistome
ERR4398747		composite	shotgun	France	FR_veal_farm409	None			multiple	None				None	None	None	Duarte AS et al. (2021): Metagenomics-Based Approach to Source-Attribution of Antimicrobial Resistance Determinants – Identification of Reservoir Resistome Signatures
ERR4398748		composite	shotgun	France	FR_veal_farm410	None			multiple	None				None	None	None	Duarte AS et al. (2021): Metagenomics-Based Approach to Source-Attribution of Antimicrobial Resistance Determinants – Identification of Reservoir Resistome Signatures
ERR4398749		composite	shotgun	France	FR_veal_farm411	None			multiple	None				None	None	None	Duarte AS et al. (2021): Metagenomics-Based Approach to Source-Attribution of Antimicrobial Resistance Determinants – Identification of Reservoir Resistome Signatures
ERR4398750		composite	shotgun	France	FR_veal_farm412	None			multiple	None				None	None	None	Duarte AS et al. (2021): Metagenomics-Based Approach to Source-Attribution of Antimicrobial Resistance Determinants – Identification of Reservoir Resistome Signatures
ERR4398751		composite	shotgun	France	FR_veal_farm413	None			multiple	None				None	None	None	Duarte AS et al. (2021): Metagenomics-Based Approach to Source-Attribution of Antimicrobial Resistance Determinants – Identification of Reservoir Resistome Signatures
ERR4398752		composite	shotgun	France	FR_veal_farm414	None			multiple	None				None	None	None	Duarte AS et al. (2021): Metagenomics-Based Approach to Source-Attribution of Antimicrobial Resistance Determinants – Identification of Reservoir Resistome Signatures
ERR4398753		composite	shotgun	France	FR_veal_farm415	None			multiple	None				None	None	None	Duarte AS et al. (2021): Metagenomics-Based Approach to Source-Attribution of Antimicrobial Resistance Determinants – Identification of Reservoir Resistome Signatures
ERR4398754		composite	shotgun	France	FR_veal_farm416	None			multiple	None				None	None	None	Duarte AS et al. (2021): Metagenomics-Based Approach to Source-Attribution of Antimicrobial Resistance Determinants – Identification of Reservoir Resistome Signatures
ERR4398755		composite	shotgun	France	FR_veal_farm417	None			multiple	None				None	None	None	Duarte AS et al. (2021): Metagenomics-Based Approach to Source-Attribution of Antimicrobial Resistance Determinants – Identification of Reservoir Resistome Signatures
ERR4398756		composite	shotgun	France	FR_veal_farm418	None			multiple	None				None	None	None	Duarte AS et al. (2021): Metagenomics-Based Approach to Source-Attribution of Antimicrobial Resistance Determinants – Identification of Reservoir Resistome Signatures
ERR4398757		composite	shotgun	France	FR_veal_farm419	None			multiple	None				None	None	None	Duarte AS et al. (2021): Metagenomics-Based Approach to Source-Attribution of Antimicrobial Resistance Determinants – Identification of Reservoir Resistome Signatures
ERR4398758		composite	shotgun	France	FR_veal_farm420	None			multiple	None				None	None	None	Duarte AS et al. (2021): Metagenomics-Based Approach to Source-Attribution of Antimicrobial Resistance Determinants – Identification of Reservoir Resistome Signatures
ERR4398759		composite	shotgun	Germany	DE_veal_farm026	None			multiple	None				None	None	None	Duarte AS et al. (2021): Metagenomics-Based Approach to Source-Attribution of Antimicrobial Resistance Determinants – Identification of Reservoir Resistome Signatures
ERR4398760		composite	shotgun	Germany	DE_veal_farm023	None			multiple	None				None	None	None	Duarte AS et al. (2021): Metagenomics-Based Approach to Source-Attribution of Antimicrobial Resistance Determinants – Identification of Reservoir Resistome Signatures
ERR4398761		composite	shotgun	Germany	DE_veal_farm052	None			multiple	None				None	None	None	Duarte AS et al. (2021): Metagenomics-Based Approach to Source-Attribution of Antimicrobial Resistance Determinants – Identification of Reservoir Resistome Signatures
ERR4398762		composite	shotgun	Germany	DE_veal_farm020	None			multiple	None				None	None	None	Duarte AS et al. (2021): Metagenomics-Based Approach to Source-Attribution of Antimicrobial Resistance Determinants – Identification of Reservoir Resistome Signatures
ERR4398763		composite	shotgun	Germany	DE_veal_farm022	None			multiple	None				None	None	None	Duarte AS et al. (2021): Metagenomics-Based Approach to Source-Attribution of Antimicrobial Resistance Determinants – Identification of Reservoir Resistome Signatures
ERR4398764		composite	shotgun	Germany	DE_veal_farm024	None			multiple	None				None	None	None	Duarte AS et al. (2021): Metagenomics-Based Approach to Source-Attribution of Antimicrobial Resistance Determinants – Identification of Reservoir Resistome Signatures
ERR4398765		composite	shotgun	Germany	DE_veal_farm025	None			multiple	None				None	None	None	Duarte AS et al. (2021): Metagenomics-Based Approach to Source-Attribution of Antimicrobial Resistance Determinants – Identification of Reservoir Resistome Signatures
ERR4398766		composite	shotgun	Netherlands	NL_veal_farm101	None			multiple	None				None	None	None	Duarte AS et al. (2021): Metagenomics-Based Approach to Source-Attribution of Antimicrobial Resistance Determinants – Identification of Reservoir Resistome Signatures
ERR4398767		composite	shotgun	Netherlands	NL_veal_farm102	None			multiple	None				None	None	None	Duarte AS et al. (2021): Metagenomics-Based Approach to Source-Attribution of Antimicrobial Resistance Determinants – Identification of Reservoir Resistome Signatures
ERR4398768		composite	shotgun	Netherlands	NL_veal_farm103	None			multiple	None				None	None	None	Duarte AS et al. (2021): Metagenomics-Based Approach to Source-Attribution of Antimicrobial Resistance Determinants – Identification of Reservoir Resistome Signatures
ERR4398769		composite	shotgun	Netherlands	NL_veal_farm104	None			multiple	None				None	None	None	Duarte AS et al. (2021): Metagenomics-Based Approach to Source-Attribution of Antimicrobial Resistance Determinants – Identification of Reservoir Resistome Signatures
ERR4398770		composite	shotgun	Netherlands	NL_veal_farm105	None			multiple	None				None	None	None	Duarte AS et al. (2021): Metagenomics-Based Approach to Source-Attribution of Antimicrobial Resistance Determinants – Identification of Reservoir Resistome Signatures
ERR4398771		composite	shotgun	Netherlands	NL_veal_farm106	None			multiple	None				None	None	None	Duarte AS et al. (2021): Metagenomics-Based Approach to Source-Attribution of Antimicrobial Resistance Determinants – Identification of Reservoir Resistome Signatures
ERR4398772		composite	shotgun	Netherlands	NL_veal_farm107	None			multiple	None				None	None	None	Duarte AS et al. (2021): Metagenomics-Based Approach to Source-Attribution of Antimicrobial Resistance Determinants – Identification of Reservoir Resistome Signatures
ERR4398773		composite	shotgun	Netherlands	NL_veal_farm108	None			multiple	None				None	None	None	Duarte AS et al. (2021): Metagenomics-Based Approach to Source-Attribution of Antimicrobial Resistance Determinants – Identification of Reservoir Resistome Signatures
ERR4398774		composite	shotgun	Netherlands	NL_veal_farm109	None			multiple	None				None	None	None	Duarte AS et al. (2021): Metagenomics-Based Approach to Source-Attribution of Antimicrobial Resistance Determinants – Identification of Reservoir Resistome Signatures
ERR4398775		composite	shotgun	Netherlands	NL_veal_farm110	None			multiple	None				None	None	None	Duarte AS et al. (2021): Metagenomics-Based Approach to Source-Attribution of Antimicrobial Resistance Determinants – Identification of Reservoir Resistome Signatures
ERR4398776		composite	shotgun	Netherlands	NL_veal_farm111	None			multiple	None				None	None	None	Duarte AS et al. (2021): Metagenomics-Based Approach to Source-Attribution of Antimicrobial Resistance Determinants – Identification of Reservoir Resistome Signatures
ERR4398777		composite	shotgun	Netherlands	NL_veal_farm112	None			multiple	None				None	None	None	Duarte AS et al. (2021): Metagenomics-Based Approach to Source-Attribution of Antimicrobial Resistance Determinants – Identification of Reservoir Resistome Signatures
ERR4398778		composite	shotgun	Netherlands	NL_veal_farm113	None			multiple	None				None	None	None	Duarte AS et al. (2021): Metagenomics-Based Approach to Source-Attribution of Antimicrobial Resistance Determinants – Identification of Reservoir Resistome Signatures
ERR4398779		composite	shotgun	Netherlands	NL_veal_farm114	None			multiple	None				None	None	None	Duarte AS et al. (2021): Metagenomics-Based Approach to Source-Attribution of Antimicrobial Resistance Determinants – Identification of Reservoir Resistome Signatures
ERR4398787		composite	shotgun	Netherlands	NL_veal_farm100	None			multiple	None				None	None	None	Duarte AS et al. (2021): Metagenomics-Based Approach to Source-Attribution of Antimicrobial Resistance Determinants – Identification of Reservoir Resistome Signatures
ERR4398788		composite	shotgun	Netherlands	NL_veal_farm115	None			multiple	None				None	None	None	Duarte AS et al. (2021): Metagenomics-Based Approach to Source-Attribution of Antimicrobial Resistance Determinants – Identification of Reservoir Resistome Signatures
ERR4398789		composite	shotgun	Netherlands	NL_veal_farm116	None			multiple	None				None	None	None	Duarte AS et al. (2021): Metagenomics-Based Approach to Source-Attribution of Antimicrobial Resistance Determinants – Identification of Reservoir Resistome Signatures
ERR4398790		composite	shotgun	Netherlands	NL_veal_farm117	None			multiple	None				None	None	None	Duarte AS et al. (2021): Metagenomics-Based Approach to Source-Attribution of Antimicrobial Resistance Determinants – Identification of Reservoir Resistome Signatures
ERR4398791		composite	shotgun	Netherlands	NL_veal_farm118	None			multiple	None				None	None	None	Duarte AS et al. (2021): Metagenomics-Based Approach to Source-Attribution of Antimicrobial Resistance Determinants – Identification of Reservoir Resistome Signatures
ERR4398792		composite	shotgun	Netherlands	NL_veal_farm119	None			multiple	None				None	None	None	Duarte AS et al. (2021): Metagenomics-Based Approach to Source-Attribution of Antimicrobial Resistance Determinants – Identification of Reservoir Resistome Signatures
ERR4398793		composite	shotgun	Germany	DE_veal_farm021	None			multiple	None				None	None	None	Duarte AS et al. (2021): Metagenomics-Based Approach to Source-Attribution of Antimicrobial Resistance Determinants – Identification of Reservoir Resistome Signatures
ERR4398794		composite	shotgun	Germany	DE_veal_farm027	None			multiple	None				None	None	None	Duarte AS et al. (2021): Metagenomics-Based Approach to Source-Attribution of Antimicrobial Resistance Determinants – Identification of Reservoir Resistome Signatures
ERR4398795		composite	shotgun	Germany	DE_veal_farm028	None			multiple	None				None	None	None	Duarte AS et al. (2021): Metagenomics-Based Approach to Source-Attribution of Antimicrobial Resistance Determinants – Identification of Reservoir Resistome Signatures
ERR4398796		composite	shotgun	Germany	DE_veal_farm029	None			multiple	None				None	None	None	Duarte AS et al. (2021): Metagenomics-Based Approach to Source-Attribution of Antimicrobial Resistance Determinants – Identification of Reservoir Resistome Signatures
ERR4398797		composite	shotgun	Germany	DE_veal_farm030	None			multiple	None				None	None	None	Duarte AS et al. (2021): Metagenomics-Based Approach to Source-Attribution of Antimicrobial Resistance Determinants – Identification of Reservoir Resistome Signatures
ERR4398798		composite	shotgun	Germany	DE_veal_farm031	None			multiple	None				None	None	None	Duarte AS et al. (2021): Metagenomics-Based Approach to Source-Attribution of Antimicrobial Resistance Determinants – Identification of Reservoir Resistome Signatures
ERR4398799		composite	shotgun	Germany	DE_veal_farm033	None			multiple	None				None	None	None	Duarte AS et al. (2021): Metagenomics-Based Approach to Source-Attribution of Antimicrobial Resistance Determinants – Identification of Reservoir Resistome Signatures
ERR4398800		composite	shotgun	Germany	DE_veal_farm034	None			multiple	None				None	None	None	Duarte AS et al. (2021): Metagenomics-Based Approach to Source-Attribution of Antimicrobial Resistance Determinants – Identification of Reservoir Resistome Signatures
ERR4398801		composite	shotgun	Germany	DE_veal_farm035	None			multiple	None				None	None	None	Duarte AS et al. (2021): Metagenomics-Based Approach to Source-Attribution of Antimicrobial Resistance Determinants – Identification of Reservoir Resistome Signatures
ERR4398802		composite	shotgun	Germany	DE_veal_farm036	None			multiple	None				None	None	None	Duarte AS et al. (2021): Metagenomics-Based Approach to Source-Attribution of Antimicrobial Resistance Determinants – Identification of Reservoir Resistome Signatures
ERR4398803		composite	shotgun	Germany	DE_veal_farm037	None			multiple	None				None	None	None	Duarte AS et al. (2021): Metagenomics-Based Approach to Source-Attribution of Antimicrobial Resistance Determinants – Identification of Reservoir Resistome Signatures
ERR4398804		composite	shotgun	Germany	DE_veal_farm038	None			multiple	None				None	None	None	Duarte AS et al. (2021): Metagenomics-Based Approach to Source-Attribution of Antimicrobial Resistance Determinants – Identification of Reservoir Resistome Signatures
ERR4398805		composite	shotgun	Germany	DE_veal_farm039	None			multiple	None				None	None	None	Duarte AS et al. (2021): Metagenomics-Based Approach to Source-Attribution of Antimicrobial Resistance Determinants – Identification of Reservoir Resistome Signatures
ERR4398806		composite	shotgun	Germany	DE_veal_farm040	None			multiple	None				None	None	None	Duarte AS et al. (2021): Metagenomics-Based Approach to Source-Attribution of Antimicrobial Resistance Determinants – Identification of Reservoir Resistome Signatures
ERR4398807		composite	shotgun	Germany	DE_veal_farm105	None			multiple	None				None	None	None	Duarte AS et al. (2021): Metagenomics-Based Approach to Source-Attribution of Antimicrobial Resistance Determinants – Identification of Reservoir Resistome Signatures
ERR4398808		composite	shotgun	France	FR_veal_farm401	None			multiple	None				None	None	None	Duarte AS et al. (2021): Metagenomics-Based Approach to Source-Attribution of Antimicrobial Resistance Determinants – Identification of Reservoir Resistome Signatures
ERR4398809		composite	shotgun	France	FR_veal_farm402	None			multiple	None				None	None	None	Duarte AS et al. (2021): Metagenomics-Based Approach to Source-Attribution of Antimicrobial Resistance Determinants – Identification of Reservoir Resistome Signatures
ERR4398810		composite	shotgun	France	FR_veal_farm403	None			multiple	None				None	None	None	Duarte AS et al. (2021): Metagenomics-Based Approach to Source-Attribution of Antimicrobial Resistance Determinants – Identification of Reservoir Resistome Signatures
ERR4398811		composite	shotgun	France	FR_veal_farm404	None			multiple	None				None	None	None	Duarte AS et al. (2021): Metagenomics-Based Approach to Source-Attribution of Antimicrobial Resistance Determinants – Identification of Reservoir Resistome Signatures
ERR4398812		composite	shotgun	France	FR_veal_farm405	None			multiple	None				None	None	None	Duarte AS et al. (2021): Metagenomics-Based Approach to Source-Attribution of Antimicrobial Resistance Determinants – Identification of Reservoir Resistome Signatures
ERR4398813		composite	shotgun	France	FR_veal_farm406	None			multiple	None				None	None	None	Duarte AS et al. (2021): Metagenomics-Based Approach to Source-Attribution of Antimicrobial Resistance Determinants – Identification of Reservoir Resistome Signatures
ERR4398814		composite	shotgun	France	FR_veal_farm407	None			multiple	None				None	None	None	Duarte AS et al. (2021): Metagenomics-Based Approach to Source-Attribution of Antimicrobial Resistance Determinants – Identification of Reservoir Resistome Signatures
SRR3053164		feedlot	shotgun	USA,Colorado	A	None		multiple	multiple	None				None	None	None	Noyes NR et al. (2016): Resistome diversity in cattle and the environment decreases during beef production
SRR3053167		feedlot	shotgun	USA,Colorado	B	None		multiple	multiple	None				None	None	None	Noyes NR et al. (2016): Resistome diversity in cattle and the environment decreases during beef production
SRR3053163		feedlot	shotgun	USA,Colorado	C	None		multiple	multiple	None				None	None	None	Noyes NR et al. (2016): Resistome diversity in cattle and the environment decreases during beef production
SRR3053162		feedlot	shotgun	USA,Colorado	D	None		multiple	multiple	None				None	None	None	Noyes NR et al. (2016): Resistome diversity in cattle and the environment decreases during beef production
SRR3053169		feedlot	shotgun	USA,Texas	E	None		multiple	multiple	None				None	None	None	Noyes NR et al. (2016): Resistome diversity in cattle and the environment decreases during beef production
SRR3053176		feedlot	shotgun	USA,Texas	F	None		multiple	multiple	None				None	None	None	Noyes NR et al. (2016): Resistome diversity in cattle and the environment decreases during beef production
SRR3053180		feedlot	shotgun	USA,Texas	G	None		multiple	multiple	None				None	None	None	Noyes NR et al. (2016): Resistome diversity in cattle and the environment decreases during beef production
SRR3053138		feedlot	shotgun	USA,Texas	H	None		multiple	multiple	None				None	None	None	Noyes NR et al. (2016): Resistome diversity in cattle and the environment decreases during beef production
SRR3053181		feedlot	shotgun	USA,Colorado	A	None		multiple	multiple	None				None	None	None	Noyes NR et al. (2016): Resistome diversity in cattle and the environment decreases during beef production
SRR3053172		feedlot	shotgun	USA,Colorado	B	None		multiple	multiple	None				None	None	None	Noyes NR et al. (2016): Resistome diversity in cattle and the environment decreases during beef production
SRR3053213		feedlot	shotgun	USA,Colorado	C	None		multiple	multiple	None				None	None	None	Noyes NR et al. (2016): Resistome diversity in cattle and the environment decreases during beef production
SRR3053146		feedlot	shotgun	USA,Colorado	D	None		multiple	multiple	None				None	None	None	Noyes NR et al. (2016): Resistome diversity in cattle and the environment decreases during beef production
SRR3053145		feedlot	shotgun	USA,Texas	E	None		multiple	multiple	None				None	None	None	Noyes NR et al. (2016): Resistome diversity in cattle and the environment decreases during beef production
SRR3053209		feedlot	shotgun	USA,Texas	F	None		multiple	multiple	None				None	None	None	Noyes NR et al. (2016): Resistome diversity in cattle and the environment decreases during beef production
SRR3053147		feedlot	shotgun	USA,Texas	G	None		multiple	multiple	None				None	None	None	Noyes NR et al. (2016): Resistome diversity in cattle and the environment decreases during beef production
SRR3053217		feedlot	shotgun	USA,Texas	H	None		multiple	multiple	None				None	None	None	Noyes NR et al. (2016): Resistome diversity in cattle and the environment decreases during beef production
SRR3053207		holding pen	shotgun	USA,Colorado	A	None		multiple	multiple	None				None	None	None	Noyes NR et al. (2016): Resistome diversity in cattle and the environment decreases during beef production
SRR3053171		holding pen	shotgun	USA,Colorado	B	None		multiple	multiple	None				None	None	None	Noyes NR et al. (2016): Resistome diversity in cattle and the environment decreases during beef production
SRR3053208		holding pen	shotgun	USA,Colorado	C	None		multiple	multiple	None				None	None	None	Noyes NR et al. (2016): Resistome diversity in cattle and the environment decreases during beef production
SRR3053212		holding pen	shotgun	USA,Colorado	D	None		multiple	multiple	None				None	None	None	Noyes NR et al. (2016): Resistome diversity in cattle and the environment decreases during beef production
SRR3053215		holding pen	shotgun	USA,Texas	E	None		multiple	multiple	None				None	None	None	Noyes NR et al. (2016): Resistome diversity in cattle and the environment decreases during beef production
SRR3053211		holding pen	shotgun	USA,Texas	F	None		multiple	multiple	None				None	None	None	Noyes NR et al. (2016): Resistome diversity in cattle and the environment decreases during beef production
SRR3053210		holding pen	shotgun	USA,Texas	G	None		multiple	multiple	None				None	None	None	Noyes NR et al. (2016): Resistome diversity in cattle and the environment decreases during beef production
SRR3053216		holding pen	shotgun	USA,Texas	H	None		multiple	multiple	None				None	None	None	Noyes NR et al. (2016): Resistome diversity in cattle and the environment decreases during beef production
SRR5678934		Pen floor	shotgun	USA: Colorado	Conventional dairy farm	None		antibiotics	multiple	None				None	None	None	Rovira P et al. (2019): Characterization of the Microbial Resistome in Conventional and “Raised Without Antibiotics” Beef and Dairy Production Systems
SRR5678935		Pen floor	shotgun	USA: Colorado	Conventional dairy farm	None		antibiotics	multiple	None				None	None	None	Rovira P et al. (2019): Characterization of the Microbial Resistome in Conventional and “Raised Without Antibiotics” Beef and Dairy Production Systems
SRR5678937		Pen floor	shotgun	USA: Colorado	Conventional dairy farm	None		antibiotics	multiple	None				None	None	None	Rovira P et al. (2019): Characterization of the Microbial Resistome in Conventional and “Raised Without Antibiotics” Beef and Dairy Production Systems
SRR5679010		Pen floor	shotgun	USA: Colorado	Conventional dairy farm	None		antibiotics	multiple	None				None	None	None	Rovira P et al. (2019): Characterization of the Microbial Resistome in Conventional and “Raised Without Antibiotics” Beef and Dairy Production Systems
SRR5679022		Pen floor	shotgun	USA: Colorado	Conventional dairy farm	None		antibiotics	multiple	None				None	None	None	Rovira P et al. (2019): Characterization of the Microbial Resistome in Conventional and “Raised Without Antibiotics” Beef and Dairy Production Systems
SRR5679023		Pen floor	shotgun	USA: Colorado	Conventional dairy farm	None		antibiotics	multiple	None				None	None	None	Rovira P et al. (2019): Characterization of the Microbial Resistome in Conventional and “Raised Without Antibiotics” Beef and Dairy Production Systems
SRR5679024		Pen floor	shotgun	USA: Colorado	Conventional dairy farm	None		antibiotics	multiple	None				None	None	None	Rovira P et al. (2019): Characterization of the Microbial Resistome in Conventional and “Raised Without Antibiotics” Beef and Dairy Production Systems
SRR5679025		Pen floor	shotgun	USA: Colorado	Conventional dairy farm	None		antibiotics	multiple	None				None	None	None	Rovira P et al. (2019): Characterization of the Microbial Resistome in Conventional and “Raised Without Antibiotics” Beef and Dairy Production Systems
SRR5679026		Pen floor	shotgun	USA: Colorado	Conventional dairy farm	None		antibiotics	multiple	None				None	None	None	Rovira P et al. (2019): Characterization of the Microbial Resistome in Conventional and “Raised Without Antibiotics” Beef and Dairy Production Systems
SRR5679039		Pen floor	shotgun	USA: Colorado	Conventional dairy farm	None		antibiotics	multiple	None				None	None	None	Rovira P et al. (2019): Characterization of the Microbial Resistome in Conventional and “Raised Without Antibiotics” Beef and Dairy Production Systems
SRR5679040		Pen floor	shotgun	USA: Colorado	Conventional dairy farm	None		antibiotics	multiple	None				None	None	None	Rovira P et al. (2019): Characterization of the Microbial Resistome in Conventional and “Raised Without Antibiotics” Beef and Dairy Production Systems
SRR5679041		Pen floor	shotgun	USA: Colorado	Conventional dairy farm	None		antibiotics	multiple	None				None	None	None	Rovira P et al. (2019): Characterization of the Microbial Resistome in Conventional and “Raised Without Antibiotics” Beef and Dairy Production Systems
SRR5679042		Pen floor	shotgun	USA: Colorado	Conventional dairy farm	None		antibiotics	multiple	None				None	None	None	Rovira P et al. (2019): Characterization of the Microbial Resistome in Conventional and “Raised Without Antibiotics” Beef and Dairy Production Systems
SRR5679043		Pen floor	shotgun	USA: Colorado	Conventional dairy farm	None		antibiotics	multiple	None				None	None	None	Rovira P et al. (2019): Characterization of the Microbial Resistome in Conventional and “Raised Without Antibiotics” Beef and Dairy Production Systems
SRR5679044		Pen floor	shotgun	USA: Colorado	Conventional dairy farm	None		antibiotics	multiple	None				None	None	None	Rovira P et al. (2019): Characterization of the Microbial Resistome in Conventional and “Raised Without Antibiotics” Beef and Dairy Production Systems
SRR5679045		Pen floor	shotgun	USA: Colorado	Conventional dairy farm	None		antibiotics	multiple	None				None	None	None	Rovira P et al. (2019): Characterization of the Microbial Resistome in Conventional and “Raised Without Antibiotics” Beef and Dairy Production Systems
SRR5678926		Pen floor	shotgun	Canada:Alberta	Conventional Feedlot	None		antibiotics	multiple	None				None	None	None	Rovira P et al. (2019): Characterization of the Microbial Resistome in Conventional and “Raised Without Antibiotics” Beef and Dairy Production Systems
SRR5678929		Pen floor	shotgun	Canada:Alberta	Conventional Feedlot	None		antibiotics	multiple	None				None	None	None	Rovira P et al. (2019): Characterization of the Microbial Resistome in Conventional and “Raised Without Antibiotics” Beef and Dairy Production Systems
SRR5678930		Pen floor	shotgun	Canada:Alberta	Conventional Feedlot	None		antibiotics	multiple	None				None	None	None	Rovira P et al. (2019): Characterization of the Microbial Resistome in Conventional and “Raised Without Antibiotics” Beef and Dairy Production Systems
SRR5678931		Pen floor	shotgun	Canada:Alberta	Conventional Feedlot	None		antibiotics	multiple	None				None	None	None	Rovira P et al. (2019): Characterization of the Microbial Resistome in Conventional and “Raised Without Antibiotics” Beef and Dairy Production Systems
SRR5678932		Pen floor	shotgun	Canada:Alberta	Conventional Feedlot	None		antibiotics	multiple	None				None	None	None	Rovira P et al. (2019): Characterization of the Microbial Resistome in Conventional and “Raised Without Antibiotics” Beef and Dairy Production Systems
SRR5679017		Pen floor	shotgun	Canada:Alberta	Conventional Feedlot	None		antibiotics	multiple	None				None	None	None	Rovira P et al. (2019): Characterization of the Microbial Resistome in Conventional and “Raised Without Antibiotics” Beef and Dairy Production Systems
SRR5679018		Pen floor	shotgun	Canada:Alberta	Conventional Feedlot	None		antibiotics	multiple	None				None	None	None	Rovira P et al. (2019): Characterization of the Microbial Resistome in Conventional and “Raised Without Antibiotics” Beef and Dairy Production Systems
SRR5679019		Pen floor	shotgun	Canada:Alberta	Conventional Feedlot	None		antibiotics	multiple	None				None	None	None	Rovira P et al. (2019): Characterization of the Microbial Resistome in Conventional and “Raised Without Antibiotics” Beef and Dairy Production Systems
SRR5679020		Pen floor	shotgun	Canada:Alberta	Conventional Feedlot	None		antibiotics	multiple	None				None	None	None	Rovira P et al. (2019): Characterization of the Microbial Resistome in Conventional and “Raised Without Antibiotics” Beef and Dairy Production Systems
SRR5679021		Pen floor	shotgun	Canada:Alberta	Conventional Feedlot	None		antibiotics	multiple	None				None	None	None	Rovira P et al. (2019): Characterization of the Microbial Resistome in Conventional and “Raised Without Antibiotics” Beef and Dairy Production Systems
SRR5679033		Pen floor	shotgun	Canada:Alberta	Conventional Feedlot	None		antibiotics	multiple	None				None	None	None	Rovira P et al. (2019): Characterization of the Microbial Resistome in Conventional and “Raised Without Antibiotics” Beef and Dairy Production Systems
SRR5679034		Pen floor	shotgun	Canada:Alberta	Conventional Feedlot	None		antibiotics	multiple	None				None	None	None	Rovira P et al. (2019): Characterization of the Microbial Resistome in Conventional and “Raised Without Antibiotics” Beef and Dairy Production Systems
SRR5679035		Pen floor	shotgun	Canada:Alberta	Conventional Feedlot	None		antibiotics	multiple	None				None	None	None	Rovira P et al. (2019): Characterization of the Microbial Resistome in Conventional and “Raised Without Antibiotics” Beef and Dairy Production Systems
SRR5679036		Pen floor	shotgun	Canada:Alberta	Conventional Feedlot	None		antibiotics	multiple	None				None	None	None	Rovira P et al. (2019): Characterization of the Microbial Resistome in Conventional and “Raised Without Antibiotics” Beef and Dairy Production Systems
SRR5679037		Pen floor	shotgun	Canada:Alberta	Conventional Feedlot	None		antibiotics	multiple	None				None	None	None	Rovira P et al. (2019): Characterization of the Microbial Resistome in Conventional and “Raised Without Antibiotics” Beef and Dairy Production Systems
SRR5678982		Pen floor	shotgun	Canada:Alberta	Natural Feedlot	None		no antibiotics	multiple	None				None	None	None	Rovira P et al. (2019): Characterization of the Microbial Resistome in Conventional and “Raised Without Antibiotics” Beef and Dairy Production Systems
SRR5678983		Pen floor	shotgun	Canada:Alberta	Natural Feedlot	None		no antibiotics	multiple	None				None	None	None	Rovira P et al. (2019): Characterization of the Microbial Resistome in Conventional and “Raised Without Antibiotics” Beef and Dairy Production Systems
SRR5678984		Pen floor	shotgun	Canada:Alberta	Natural Feedlot	None		no antibiotics	multiple	None				None	None	None	Rovira P et al. (2019): Characterization of the Microbial Resistome in Conventional and “Raised Without Antibiotics” Beef and Dairy Production Systems
SRR5678985		Pen floor	shotgun	Canada:Alberta	Natural Feedlot	None		no antibiotics	multiple	None				None	None	None	Rovira P et al. (2019): Characterization of the Microbial Resistome in Conventional and “Raised Without Antibiotics” Beef and Dairy Production Systems
SRR5678986		Pen floor	shotgun	Canada:Alberta	Natural Feedlot	None		no antibiotics	multiple	None				None	None	None	Rovira P et al. (2019): Characterization of the Microbial Resistome in Conventional and “Raised Without Antibiotics” Beef and Dairy Production Systems
SRR5678987		Pen floor	shotgun	Canada:Alberta	Natural Feedlot	None		no antibiotics	multiple	None				None	None	None	Rovira P et al. (2019): Characterization of the Microbial Resistome in Conventional and “Raised Without Antibiotics” Beef and Dairy Production Systems
SRR5678988		Pen floor	shotgun	Canada:Alberta	Natural Feedlot	None		no antibiotics	multiple	None				None	None	None	Rovira P et al. (2019): Characterization of the Microbial Resistome in Conventional and “Raised Without Antibiotics” Beef and Dairy Production Systems
SRR5678989		Pen floor	shotgun	Canada:Alberta	Natural Feedlot	None		no antibiotics	multiple	None				None	None	None	Rovira P et al. (2019): Characterization of the Microbial Resistome in Conventional and “Raised Without Antibiotics” Beef and Dairy Production Systems
SRR5678990		Pen floor	shotgun	Canada:Alberta	Natural Feedlot	None		no antibiotics	multiple	None				None	None	None	Rovira P et al. (2019): Characterization of the Microbial Resistome in Conventional and “Raised Without Antibiotics” Beef and Dairy Production Systems
SRR5678991		Pen floor	shotgun	Canada:Alberta	Natural Feedlot	None		no antibiotics	multiple	None				None	None	None	Rovira P et al. (2019): Characterization of the Microbial Resistome in Conventional and “Raised Without Antibiotics” Beef and Dairy Production Systems
SRR5679001		Pen floor	shotgun	Canada:Alberta	Natural Feedlot	None		no antibiotics	multiple	None				None	None	None	Rovira P et al. (2019): Characterization of the Microbial Resistome in Conventional and “Raised Without Antibiotics” Beef and Dairy Production Systems
SRR5679005		Pen floor	shotgun	Canada:Alberta	Natural Feedlot	None		no antibiotics	multiple	None				None	None	None	Rovira P et al. (2019): Characterization of the Microbial Resistome in Conventional and “Raised Without Antibiotics” Beef and Dairy Production Systems
SRR5679006		Pen floor	shotgun	Canada:Alberta	Natural Feedlot	None		no antibiotics	multiple	None				None	None	None	Rovira P et al. (2019): Characterization of the Microbial Resistome in Conventional and “Raised Without Antibiotics” Beef and Dairy Production Systems
SRR5679007		Pen floor	shotgun	Canada:Alberta	Natural Feedlot	None		no antibiotics	multiple	None				None	None	None	Rovira P et al. (2019): Characterization of the Microbial Resistome in Conventional and “Raised Without Antibiotics” Beef and Dairy Production Systems
SRR5679008		Pen floor	shotgun	Canada:Alberta	Natural Feedlot	None		no antibiotics	multiple	None				None	None	None	Rovira P et al. (2019): Characterization of the Microbial Resistome in Conventional and “Raised Without Antibiotics” Beef and Dairy Production Systems
SRR5679009		Pen floor	shotgun	Canada:Alberta	Natural Feedlot	None		no antibiotics	multiple	None				None	None	None	Rovira P et al. (2019): Characterization of the Microbial Resistome in Conventional and “Raised Without Antibiotics” Beef and Dairy Production Systems
SRR5678979		Pen floor	shotgun	USA: Colorado	Organic dairy farm	None		no antibiotics	multiple	None				None	None	None	Rovira P et al. (2019): Characterization of the Microbial Resistome in Conventional and “Raised Without Antibiotics” Beef and Dairy Production Systems
SRR5678980		Pen floor	shotgun	USA: Colorado	Organic dairy farm	None		no antibiotics	multiple	None				None	None	None	Rovira P et al. (2019): Characterization of the Microbial Resistome in Conventional and “Raised Without Antibiotics” Beef and Dairy Production Systems
SRR5678981		Pen floor	shotgun	USA: Colorado	Organic dairy farm	None		no antibiotics	multiple	None				None	None	None	Rovira P et al. (2019): Characterization of the Microbial Resistome in Conventional and “Raised Without Antibiotics” Beef and Dairy Production Systems
SRR5678992		Pen floor	shotgun	USA: Colorado	Organic dairy farm	None		no antibiotics	multiple	None				None	None	None	Rovira P et al. (2019): Characterization of the Microbial Resistome in Conventional and “Raised Without Antibiotics” Beef and Dairy Production Systems
SRR5678993		Pen floor	shotgun	USA: Colorado	Organic dairy farm	None		no antibiotics	multiple	None				None	None	None	Rovira P et al. (2019): Characterization of the Microbial Resistome in Conventional and “Raised Without Antibiotics” Beef and Dairy Production Systems
SRR5678994		Pen floor	shotgun	USA: Colorado	Organic dairy farm	None		no antibiotics	multiple	None				None	None	None	Rovira P et al. (2019): Characterization of the Microbial Resistome in Conventional and “Raised Without Antibiotics” Beef and Dairy Production Systems
SRR5678995		Pen floor	shotgun	USA: Colorado	Organic dairy farm	None		no antibiotics	multiple	None				None	None	None	Rovira P et al. (2019): Characterization of the Microbial Resistome in Conventional and “Raised Without Antibiotics” Beef and Dairy Production Systems
SRR5678996		Pen floor	shotgun	USA: Colorado	Organic dairy farm	None		no antibiotics	multiple	None				None	None	None	Rovira P et al. (2019): Characterization of the Microbial Resistome in Conventional and “Raised Without Antibiotics” Beef and Dairy Production Systems
SRR5679011		Pen floor	shotgun	USA: Colorado	Organic dairy farm	None		no antibiotics	multiple	None				None	None	None	Rovira P et al. (2019): Characterization of the Microbial Resistome in Conventional and “Raised Without Antibiotics” Beef and Dairy Production Systems
SRR5679012		Pen floor	shotgun	USA: Colorado	Organic dairy farm	None		no antibiotics	multiple	None				None	None	None	Rovira P et al. (2019): Characterization of the Microbial Resistome in Conventional and “Raised Without Antibiotics” Beef and Dairy Production Systems
SRR5679013		Pen floor	shotgun	USA: Colorado	Organic dairy farm	None		no antibiotics	multiple	None				None	None	None	Rovira P et al. (2019): Characterization of the Microbial Resistome in Conventional and “Raised Without Antibiotics” Beef and Dairy Production Systems
SRR5679015		Pen floor	shotgun	USA: Colorado	Organic dairy farm	None		no antibiotics	multiple	None				None	None	None	Rovira P et al. (2019): Characterization of the Microbial Resistome in Conventional and “Raised Without Antibiotics” Beef and Dairy Production Systems
SRR5679016		Pen floor	shotgun	USA: Colorado	Organic dairy farm	None		no antibiotics	multiple	None				None	None	None	Rovira P et al. (2019): Characterization of the Microbial Resistome in Conventional and “Raised Without Antibiotics” Beef and Dairy Production Systems
SRR5679029		Pen floor	shotgun	USA: Colorado	Organic dairy farm	None		no antibiotics	multiple	None				None	None	None	Rovira P et al. (2019): Characterization of the Microbial Resistome in Conventional and “Raised Without Antibiotics” Beef and Dairy Production Systems
SRR5679030		Pen floor	shotgun	USA: Colorado	Organic dairy farm	None		no antibiotics	multiple	None				None	None	None	Rovira P et al. (2019): Characterization of the Microbial Resistome in Conventional and “Raised Without Antibiotics” Beef and Dairy Production Systems
SRR5679031		Pen floor	shotgun	USA: Colorado	Organic dairy farm	None		no antibiotics	multiple	None				None	None	None	Rovira P et al. (2019): Characterization of the Microbial Resistome in Conventional and “Raised Without Antibiotics” Beef and Dairy Production Systems
SRR10098302		composite	shotgun	Pennsylvania, US	multiple	None	calf		multiple	None				None	None	None	Bradd J. Haley et al. (2020): Differences in the Microbial Community and Resistome Structures of Feces from Preweaned Calves and Lactating Dairy Cows in Commercial Dairy Herds
SRR10098303		composite	shotgun	Pennsylvania, US	multiple	None	calf		multiple	None				None	None	None	Bradd J. Haley et al. (2020): Differences in the Microbial Community and Resistome Structures of Feces from Preweaned Calves and Lactating Dairy Cows in Commercial Dairy Herds
SRR10098304		composite	shotgun	Pennsylvania, US	multiple	None	calf		multiple	None				None	None	None	Bradd J. Haley et al. (2020): Differences in the Microbial Community and Resistome Structures of Feces from Preweaned Calves and Lactating Dairy Cows in Commercial Dairy Herds
SRR10098305		composite	shotgun	Pennsylvania, US	multiple	None	calf		multiple	None				None	None	None	Bradd J. Haley et al. (2020): Differences in the Microbial Community and Resistome Structures of Feces from Preweaned Calves and Lactating Dairy Cows in Commercial Dairy Herds
SRR10098307		composite	shotgun	Pennsylvania, US	multiple	None	calf		multiple	None				None	None	None	Bradd J. Haley et al. (2020): Differences in the Microbial Community and Resistome Structures of Feces from Preweaned Calves and Lactating Dairy Cows in Commercial Dairy Herds
SRR10098308		composite	shotgun	Pennsylvania, US	multiple	None	calf		multiple	None				None	None	None	Bradd J. Haley et al. (2020): Differences in the Microbial Community and Resistome Structures of Feces from Preweaned Calves and Lactating Dairy Cows in Commercial Dairy Herds
SRR10098309		composite	shotgun	Pennsylvania, US	multiple	None	calf		multiple	None				None	None	None	Bradd J. Haley et al. (2020): Differences in the Microbial Community and Resistome Structures of Feces from Preweaned Calves and Lactating Dairy Cows in Commercial Dairy Herds
SRR10098310		composite	shotgun	Pennsylvania, US	multiple	None	calf		multiple	None				None	None	None	Bradd J. Haley et al. (2020): Differences in the Microbial Community and Resistome Structures of Feces from Preweaned Calves and Lactating Dairy Cows in Commercial Dairy Herds
SRR10098311		composite	shotgun	Pennsylvania, US	multiple	None	calf		multiple	None				None	None	None	Bradd J. Haley et al. (2020): Differences in the Microbial Community and Resistome Structures of Feces from Preweaned Calves and Lactating Dairy Cows in Commercial Dairy Herds
SRR10098312		composite	shotgun	Pennsylvania, US	multiple	None	calf		multiple	None				None	None	None	Bradd J. Haley et al. (2020): Differences in the Microbial Community and Resistome Structures of Feces from Preweaned Calves and Lactating Dairy Cows in Commercial Dairy Herds
SRR10098313		composite	shotgun	Pennsylvania, US	multiple	None	calf		multiple	None				None	None	None	Bradd J. Haley et al. (2020): Differences in the Microbial Community and Resistome Structures of Feces from Preweaned Calves and Lactating Dairy Cows in Commercial Dairy Herds
SRR10098314		composite	shotgun	Pennsylvania, US	multiple	None	calf		multiple	None				None	None	None	Bradd J. Haley et al. (2020): Differences in the Microbial Community and Resistome Structures of Feces from Preweaned Calves and Lactating Dairy Cows in Commercial Dairy Herds
SRR10098315		composite	shotgun	Pennsylvania, US	multiple	None	calf		multiple	None				None	None	None	Bradd J. Haley et al. (2020): Differences in the Microbial Community and Resistome Structures of Feces from Preweaned Calves and Lactating Dairy Cows in Commercial Dairy Herds
SRR10098316		composite	shotgun	Pennsylvania, US	multiple	None	calf		multiple	None				None	None	None	Bradd J. Haley et al. (2020): Differences in the Microbial Community and Resistome Structures of Feces from Preweaned Calves and Lactating Dairy Cows in Commercial Dairy Herds
SRR10098318		composite	shotgun	Pennsylvania, US	multiple	None	calf		multiple	None				None	None	None	Bradd J. Haley et al. (2020): Differences in the Microbial Community and Resistome Structures of Feces from Preweaned Calves and Lactating Dairy Cows in Commercial Dairy Herds
SRR10098319		composite	shotgun	Pennsylvania, US	multiple	None	calf		multiple	None				None	None	None	Bradd J. Haley et al. (2020): Differences in the Microbial Community and Resistome Structures of Feces from Preweaned Calves and Lactating Dairy Cows in Commercial Dairy Herds
SRR10098320		composite	shotgun	Pennsylvania, US	multiple	None	calf		multiple	None				None	None	None	Bradd J. Haley et al. (2020): Differences in the Microbial Community and Resistome Structures of Feces from Preweaned Calves and Lactating Dairy Cows in Commercial Dairy Herds
SRR10098321		composite	shotgun	Pennsylvania, US	multiple	None	cow		multiple	None				None	None	None	Bradd J. Haley et al. (2020): Differences in the Microbial Community and Resistome Structures of Feces from Preweaned Calves and Lactating Dairy Cows in Commercial Dairy Herds
SRR10098322		composite	shotgun	Pennsylvania, US	multiple	None	cow		multiple	None				None	None	None	Bradd J. Haley et al. (2020): Differences in the Microbial Community and Resistome Structures of Feces from Preweaned Calves and Lactating Dairy Cows in Commercial Dairy Herds
SRR10098323		composite	shotgun	Pennsylvania, US	multiple	None	cow		multiple	None				None	None	None	Bradd J. Haley et al. (2020): Differences in the Microbial Community and Resistome Structures of Feces from Preweaned Calves and Lactating Dairy Cows in Commercial Dairy Herds
SRR10098324		composite	shotgun	Pennsylvania, US	multiple	None	cow		multiple	None				None	None	None	Bradd J. Haley et al. (2020): Differences in the Microbial Community and Resistome Structures of Feces from Preweaned Calves and Lactating Dairy Cows in Commercial Dairy Herds
SRR10098325		composite	shotgun	Pennsylvania, US	multiple	None	cow		multiple	None				None	None	None	Bradd J. Haley et al. (2020): Differences in the Microbial Community and Resistome Structures of Feces from Preweaned Calves and Lactating Dairy Cows in Commercial Dairy Herds
SRR10098326		composite	shotgun	Pennsylvania, US	multiple	None	cow		multiple	None				None	None	None	Bradd J. Haley et al. (2020): Differences in the Microbial Community and Resistome Structures of Feces from Preweaned Calves and Lactating Dairy Cows in Commercial Dairy Herds
SRR10098327		composite	shotgun	Pennsylvania, US	multiple	None	cow		multiple	None				None	None	None	Bradd J. Haley et al. (2020): Differences in the Microbial Community and Resistome Structures of Feces from Preweaned Calves and Lactating Dairy Cows in Commercial Dairy Herds
SRR10098296		composite	shotgun	Pennsylvania, US	multiple	None	cow		multiple	None				None	None	None	Bradd J. Haley et al. (2020): Differences in the Microbial Community and Resistome Structures of Feces from Preweaned Calves and Lactating Dairy Cows in Commercial Dairy Herds
SRR10098297		composite	shotgun	Pennsylvania, US	multiple	None	cow		multiple	None				None	None	None	Bradd J. Haley et al. (2020): Differences in the Microbial Community and Resistome Structures of Feces from Preweaned Calves and Lactating Dairy Cows in Commercial Dairy Herds
SRR10098298		composite	shotgun	Pennsylvania, US	multiple	None	cow		multiple	None				None	None	None	Bradd J. Haley et al. (2020): Differences in the Microbial Community and Resistome Structures of Feces from Preweaned Calves and Lactating Dairy Cows in Commercial Dairy Herds
SRR10098299		composite	shotgun	Pennsylvania, US	multiple	None	cow		multiple	None				None	None	None	Bradd J. Haley et al. (2020): Differences in the Microbial Community and Resistome Structures of Feces from Preweaned Calves and Lactating Dairy Cows in Commercial Dairy Herds
SRR10098300		composite	shotgun	Pennsylvania, US	multiple	None	cow		multiple	None				None	None	None	Bradd J. Haley et al. (2020): Differences in the Microbial Community and Resistome Structures of Feces from Preweaned Calves and Lactating Dairy Cows in Commercial Dairy Herds
SRR10098301		composite	shotgun	Pennsylvania, US	multiple	None	cow		multiple	None				None	None	None	Bradd J. Haley et al. (2020): Differences in the Microbial Community and Resistome Structures of Feces from Preweaned Calves and Lactating Dairy Cows in Commercial Dairy Herds
SRR10098306		composite	shotgun	Pennsylvania, US	multiple	None	cow		multiple	None				None	None	None	Bradd J. Haley et al. (2020): Differences in the Microbial Community and Resistome Structures of Feces from Preweaned Calves and Lactating Dairy Cows in Commercial Dairy Herds
SRR10098317		composite	shotgun	Pennsylvania, US	multiple	None	cow		multiple	None				None	None	None	Bradd J. Haley et al. (2020): Differences in the Microbial Community and Resistome Structures of Feces from Preweaned Calves and Lactating Dairy Cows in Commercial Dairy Herds
SRR10098328		composite	shotgun	Pennsylvania, US	multiple	None	cow		multiple	None				None	None	None	Bradd J. Haley et al. (2020): Differences in the Microbial Community and Resistome Structures of Feces from Preweaned Calves and Lactating Dairy Cows in Commercial Dairy Herds
SRR10098329		composite	shotgun	Pennsylvania, US	multiple	None	cow		multiple	None				None	None	None	Bradd J. Haley et al. (2020): Differences in the Microbial Community and Resistome Structures of Feces from Preweaned Calves and Lactating Dairy Cows in Commercial Dairy Herds
SRR9699912		composite	shotgun	California and Nevada, US		None		tylosin	multiple	None				None	None	None	Weinroth MD et al. (2019): Investigation of tylosin in feed of feedlot cattle and effects on liver abscess prevalence, and fecal and soil microbiomes and resistomes
SRR9699913		composite	shotgun	California and Nevada, US		None		tylosin	multiple	None				None	None	None	Weinroth MD et al. (2019): Investigation of tylosin in feed of feedlot cattle and effects on liver abscess prevalence, and fecal and soil microbiomes and resistomes
SRR9699914		composite	shotgun	California and Nevada, US		None		No	multiple	None				None	None	None	Weinroth MD et al. (2019): Investigation of tylosin in feed of feedlot cattle and effects on liver abscess prevalence, and fecal and soil microbiomes and resistomes
SRR9699915		composite	shotgun	California and Nevada, US		None		No	multiple	None				None	None	None	Weinroth MD et al. (2019): Investigation of tylosin in feed of feedlot cattle and effects on liver abscess prevalence, and fecal and soil microbiomes and resistomes
SRR9699916		composite	shotgun	Arizona, New Mexico and Texas, US		None		tylosin	multiple	None				None	None	None	Weinroth MD et al. (2019): Investigation of tylosin in feed of feedlot cattle and effects on liver abscess prevalence, and fecal and soil microbiomes and resistomes
SRR9699917		composite	shotgun	Arizona, New Mexico and Texas, US		None		tylosin	multiple	None				None	None	None	Weinroth MD et al. (2019): Investigation of tylosin in feed of feedlot cattle and effects on liver abscess prevalence, and fecal and soil microbiomes and resistomes
SRR9699865		composite	shotgun	Arizona, New Mexico and Texas, US		None		No	multiple	None				None	None	None	Weinroth MD et al. (2019): Investigation of tylosin in feed of feedlot cattle and effects on liver abscess prevalence, and fecal and soil microbiomes and resistomes
SRR9699867		composite	shotgun	Arizona, New Mexico and Texas, US		None		No	multiple	None				None	None	None	Weinroth MD et al. (2019): Investigation of tylosin in feed of feedlot cattle and effects on liver abscess prevalence, and fecal and soil microbiomes and resistomes
SRR9699910		composite	shotgun	Colorado, Montana, Utah, and Wyoming, US		None		No	multiple	None				None	None	None	Weinroth MD et al. (2019): Investigation of tylosin in feed of feedlot cattle and effects on liver abscess prevalence, and fecal and soil microbiomes and resistomes
SRR9699864		composite	shotgun	Colorado, Montana, Utah, and Wyoming, US		None		No	multiple	None				None	None	None	Weinroth MD et al. (2019): Investigation of tylosin in feed of feedlot cattle and effects on liver abscess prevalence, and fecal and soil microbiomes and resistomes
SRR9699866		composite	shotgun	Colorado, Montana, Utah, and Wyoming, US		None		tylosin	multiple	None				None	None	None	Weinroth MD et al. (2019): Investigation of tylosin in feed of feedlot cattle and effects on liver abscess prevalence, and fecal and soil microbiomes and resistomes
SRR9699869		composite	shotgun	Colorado, Montana, Utah, and Wyoming, US		None		tylosin	multiple	None				None	None	None	Weinroth MD et al. (2019): Investigation of tylosin in feed of feedlot cattle and effects on liver abscess prevalence, and fecal and soil microbiomes and resistomes
SRR9699868		composite	shotgun	Colorado, Montana, Utah, and Wyoming, US		None		No	multiple	None				None	None	None	Weinroth MD et al. (2019): Investigation of tylosin in feed of feedlot cattle and effects on liver abscess prevalence, and fecal and soil microbiomes and resistomes
SRR9699871		composite	shotgun	Colorado, Montana, Utah, and Wyoming, US		None		No	multiple	None				None	None	None	Weinroth MD et al. (2019): Investigation of tylosin in feed of feedlot cattle and effects on liver abscess prevalence, and fecal and soil microbiomes and resistomes
SRR9699870		composite	shotgun	Colorado, Montana, Utah, and Wyoming, US		None		tylosin	multiple	None				None	None	None	Weinroth MD et al. (2019): Investigation of tylosin in feed of feedlot cattle and effects on liver abscess prevalence, and fecal and soil microbiomes and resistomes
SRR9699911		composite	shotgun	Colorado, Montana, Utah, and Wyoming, US		None		tylosin	multiple	None				None	None	None	Weinroth MD et al. (2019): Investigation of tylosin in feed of feedlot cattle and effects on liver abscess prevalence, and fecal and soil microbiomes and resistomes
ERP003848		Feces	16S 454 GS FLX	Austria		None	Simmental			None			V1 to V4 (Bacteria: 8F, 926R)	35	6	None	Klein-Jöbstl D et al. (2014): Pyrosequencing reveals diverse fecal microbiota in Simmental calves during early development
ERP107029		Feces	16S Illumina MiSeq	United States		None	Holstein			None			V4 (Archaea/Bacteria: 515F, 806R)	96	48	None	Muñoz-Vargas L et al. (2018): Fecal microbiome of periparturient dairy cattle and associations with the onset of Salmonella shedding
SRP040473		Feces	16S 454 GS FLX	Canada		None	Crossbred			None			V1 to V3 (Bacteria: 8F, 534R)	22	22	None	Xu Y et al. (2014): Escherichia coli O157:H7 Super-Shedder and Non-Shedder Feedlot Steers Harbour Distinct Fecal Bacterial Communities
SRP047129		Duodenum, jejunum, cecum, colon, feces	16S 454 GS FLX	Canada		None	Crossbred Charolaise			None			V1 to V3 (Bacteria: 8F, 534R)	83	10	None	Zaheer R et al. (2017): Changes in bacterial community composition of Escherichia coli O157:H7 super-shedder cattle occur in the lower intestine
SRP055534		Feces	16S 454 GS Junior	Czech Republic		None				None			V3 to V4 (Bacteria: 347F, 803R)	35	36	None	Marija Kaevska et al. (2016): Faecal bacterial composition in dairy cows shedding Mycobacterium avium subsp. paratuberculosis in faeces in comparison with nonshedding cows
SRP056906		Feces	16S 454 GS FLX	New Zealand		None	Friesian, Jersey, Friesian _ Jersey			None			V4 to V6 (Bacteria: 451F, 1019R)	11	12	None	Young W et al. (2015): Transfer of intestinal bacterial components to mammary secretions in the cow
SRP068080		Feces	16S 454 GS Junior	South Korea		None	Dairy: breed N/A			None			V1 to V3 (Bacteria: 8F, 534R)	24	24	None	Hee-Jin Dong et al. (2016): The Fecal Microbial Communities of Dairy Cattle Shedding Shiga Toxin–Producing Escherichia coli or Campylobacter jejuni
SRP072014		Colon, Duodenum, Feces, Ileum, Jejunum, Rumen	16S Illumina MiSeq	United States		None	Holstein			None			V3 to V4 (Bacteria: 341F, 806R)	379	12	None	Yeoman CJ et al. (2018): Biogeographical Differences in the Influence of Maternal Microbial Sources on the Early Successional Development of the Bovine Neonatal Gastrointestinal tract
SRP073728		Rumen, feces	16S Illumina MiSeq	United States		None	Holstein			None			V4 (Bacteria: 515F, 806R); V6 to V8 (Archaea: Ar915F, Ar1386R)	716	15	None	Dill-McFarland KA et al. (2017): Microbial succession in the gastrointestinal tract of dairy cows from 2 weeks to first lactation
SRP082277		Feces	16S Illumina HiSeq 2500	China		None	Japanese x Red Angus x Quichuan			None			V4 (Archaea/Bacteria: 515F, 806R)	25	25	None	Shengyin Jiao et al. (2017): Effect of high-fat diet and growth stage on the diversity and composition of intestinal microbiota in healthy bovine livestock
SRP102317		Feces	16S Illumina MiSeq	Canada		None	Crossbred yearling feedlot steers			None			V1 to V3 (Bacteria: 8F, 534R)	9	10	None	Wang O et al. (2017): Interactions of the Hindgut Mucosa-Associated Microbiome with Its Host Regulate Shedding of Escherichia coli O157:H7 by Cattle
SRP116056		Colon, cecum, jejunum	16S Illumina MiSeq	Brazil		None	Holstein _ Gyr			None			V3 to V4 (Bacteria: 344F, 806R)	49	25	None	Dias J et al. (2018): Bacterial Community Dynamics across the Gastrointestinal Tracts of Dairy Calves during Preweaning Development
SRP128145		Feces	16S Illumina MiSeq	Canada		None	Angus _ Herford			None			V4 (Archaea/Bacteria: 515F, 806R)	252	36	None	Holman DB et al. (2019): Antibiotic treatment in feedlot cattle: a longitudinal study of the effect of oxytetracycline and tulathromycin on the fecal and nasopharyngeal microbiota
SRP128833		Feces	16S Illumina MiSeq	Finland		None	Ayrshire and Holstein			None			V3 to V4 (Bacteria: 344F, 806R)	31	52	None	Alipour MJ et al. (2018): The composition of the perinatal intestinal microbiota in cattle
SRS7821212		individual	shotgun	France, Saint-Gene-Champagnelle	Theix, INRAE	None	lactating cows		100069	120.0	grass(while grazing), corn silage, grass silage, hay, concentrate (Beet pulp: 30%, Wheat: 22.7%, Barley: 20%, Rapeseed meal: 15%, Non-GMO soybean meal: 7.9%, Cane molasses: 1.5%, Bi-calcium phosphorus: 1%, Trace elements vitamins: 0.9%, Dry magnesia: 0.5%, Salt: 0.5%)			None	None	None	():
SRS7821214		individual	shotgun	France, Saint-Gene-Champagnelle	Theix, INRAE	None	lactating cows		144636	72.0	grass(while grazing), corn silage, grass silage, hay, concentrate (Beet pulp: 30%, Wheat: 22.7%, Barley: 20%, Rapeseed meal: 15%, Non-GMO soybean meal: 7.9%, Cane molasses: 1.5%, Bi-calcium phosphorus: 1%, Trace elements vitamins: 0.9%, Dry magnesia: 0.5%, Salt: 0.5%)			None	None	None	():
SRS7821224		individual	shotgun	France, Saint-Gene-Champagnelle	Theix, INRAE	None	lactating cows		144888	72.0	grass(while grazing), corn silage, grass silage, hay, concentrate (Beet pulp: 30%, Wheat: 22.7%, Barley: 20%, Rapeseed meal: 15%, Non-GMO soybean meal: 7.9%, Cane molasses: 1.5%, Bi-calcium phosphorus: 1%, Trace elements vitamins: 0.9%, Dry magnesia: 0.5%, Salt: 0.5%)			None	None	None	():
SRS7821235		individual	shotgun	France, Saint-Gene-Champagnelle	Theix, INRAE	None	lactating cows		144900	72.0	grass(while grazing), corn silage, grass silage, hay, concentrate (Beet pulp: 30%, Wheat: 22.7%, Barley: 20%, Rapeseed meal: 15%, Non-GMO soybean meal: 7.9%, Cane molasses: 1.5%, Bi-calcium phosphorus: 1%, Trace elements vitamins: 0.9%, Dry magnesia: 0.5%, Salt: 0.5%)			None	None	None	():
SRS7821246		individual	shotgun	France, Saint-Gene-Champagnelle	Theix, INRAE	None	lactating cows		144910	72.0	grass(while grazing), corn silage, grass silage, hay, concentrate (Beet pulp: 30%, Wheat: 22.7%, Barley: 20%, Rapeseed meal: 15%, Non-GMO soybean meal: 7.9%, Cane molasses: 1.5%, Bi-calcium phosphorus: 1%, Trace elements vitamins: 0.9%, Dry magnesia: 0.5%, Salt: 0.5%)			None	None	None	():
SRS7821255		individual	shotgun	France, Saint-Gene-Champagnelle	Theix, INRAE	None	lactating cows		144918	72.0	grass(while grazing), corn silage, grass silage, hay, concentrate (Beet pulp: 30%, Wheat: 22.7%, Barley: 20%, Rapeseed meal: 15%, Non-GMO soybean meal: 7.9%, Cane molasses: 1.5%, Bi-calcium phosphorus: 1%, Trace elements vitamins: 0.9%, Dry magnesia: 0.5%, Salt: 0.5%)			None	None	None	():
SRS7821256		individual	shotgun	France, Saint-Gene-Champagnelle	Theix, INRAE	None	lactating cows		144923	72.0	grass(while grazing), corn silage, grass silage, hay, concentrate (Beet pulp: 30%, Wheat: 22.7%, Barley: 20%, Rapeseed meal: 15%, Non-GMO soybean meal: 7.9%, Cane molasses: 1.5%, Bi-calcium phosphorus: 1%, Trace elements vitamins: 0.9%, Dry magnesia: 0.5%, Salt: 0.5%)			None	None	None	():
SRS7821257		individual	shotgun	France, Saint-Gene-Champagnelle	Theix, INRAE	None	lactating cows		144929	72.0	grass(while grazing), corn silage, grass silage, hay, concentrate (Beet pulp: 30%, Wheat: 22.7%, Barley: 20%, Rapeseed meal: 15%, Non-GMO soybean meal: 7.9%, Cane molasses: 1.5%, Bi-calcium phosphorus: 1%, Trace elements vitamins: 0.9%, Dry magnesia: 0.5%, Salt: 0.5%)			None	None	None	():
SRS7821258		individual	shotgun	France, Saint-Gene-Champagnelle	Theix, INRAE	None	lactating cows		155432	60.0	grass(while grazing), corn silage, grass silage, hay, concentrate (Beet pulp: 30%, Wheat: 22.7%, Barley: 20%, Rapeseed meal: 15%, Non-GMO soybean meal: 7.9%, Cane molasses: 1.5%, Bi-calcium phosphorus: 1%, Trace elements vitamins: 0.9%, Dry magnesia: 0.5%, Salt: 0.5%)			None	None	None	():
SRS7821259		individual	shotgun	France, Saint-Gene-Champagnelle	Theix, INRAE	None	lactating cows		155444	60.0	grass(while grazing), corn silage, grass silage, hay, concentrate (Beet pulp: 30%, Wheat: 22.7%, Barley: 20%, Rapeseed meal: 15%, Non-GMO soybean meal: 7.9%, Cane molasses: 1.5%, Bi-calcium phosphorus: 1%, Trace elements vitamins: 0.9%, Dry magnesia: 0.5%, Salt: 0.5%)			None	None	None	():
SRS7821213		individual	shotgun	France, Saint-Gene-Champagnelle	Theix, INRAE	None	lactating cows		155455	60.0	grass(while grazing), corn silage, grass silage, hay, concentrate (Beet pulp: 30%, Wheat: 22.7%, Barley: 20%, Rapeseed meal: 15%, Non-GMO soybean meal: 7.9%, Cane molasses: 1.5%, Bi-calcium phosphorus: 1%, Trace elements vitamins: 0.9%, Dry magnesia: 0.5%, Salt: 0.5%)			None	None	None	():
SRS7821215		individual	shotgun	France, Saint-Gene-Champagnelle	Theix, INRAE	None	lactating cows		155458	60.0	grass(while grazing), corn silage, grass silage, hay, concentrate (Beet pulp: 30%, Wheat: 22.7%, Barley: 20%, Rapeseed meal: 15%, Non-GMO soybean meal: 7.9%, Cane molasses: 1.5%, Bi-calcium phosphorus: 1%, Trace elements vitamins: 0.9%, Dry magnesia: 0.5%, Salt: 0.5%)			None	None	None	():
SRS7821216		individual	shotgun	France, Saint-Gene-Champagnelle	Theix, INRAE	None	lactating cows		155461	60.0	grass(while grazing), corn silage, grass silage, hay, concentrate (Beet pulp: 30%, Wheat: 22.7%, Barley: 20%, Rapeseed meal: 15%, Non-GMO soybean meal: 7.9%, Cane molasses: 1.5%, Bi-calcium phosphorus: 1%, Trace elements vitamins: 0.9%, Dry magnesia: 0.5%, Salt: 0.5%)			None	None	None	():
SRS7821217		individual	shotgun	France, Saint-Gene-Champagnelle	Theix, INRAE	None	lactating cows		155464	60.0	grass(while grazing), corn silage, grass silage, hay, concentrate (Beet pulp: 30%, Wheat: 22.7%, Barley: 20%, Rapeseed meal: 15%, Non-GMO soybean meal: 7.9%, Cane molasses: 1.5%, Bi-calcium phosphorus: 1%, Trace elements vitamins: 0.9%, Dry magnesia: 0.5%, Salt: 0.5%)			None	None	None	():
SRS7821218		individual	shotgun	France, Saint-Gene-Champagnelle	Theix, INRAE	None	lactating cows		155626	60.0	grass(while grazing), corn silage, grass silage, hay, concentrate (Beet pulp: 30%, Wheat: 22.7%, Barley: 20%, Rapeseed meal: 15%, Non-GMO soybean meal: 7.9%, Cane molasses: 1.5%, Bi-calcium phosphorus: 1%, Trace elements vitamins: 0.9%, Dry magnesia: 0.5%, Salt: 0.5%)			None	None	None	():
SRS7821219		individual	shotgun	France, Saint-Gene-Champagnelle	Theix, INRAE	None	lactating cows		155677	60.0	grass(while grazing), corn silage, grass silage, hay, concentrate (Beet pulp: 30%, Wheat: 22.7%, Barley: 20%, Rapeseed meal: 15%, Non-GMO soybean meal: 7.9%, Cane molasses: 1.5%, Bi-calcium phosphorus: 1%, Trace elements vitamins: 0.9%, Dry magnesia: 0.5%, Salt: 0.5%)			None	None	None	():
SRS7821220		individual	shotgun	France, Saint-Gene-Champagnelle	Theix, INRAE	None	lactating cows		166547	48.0	grass(while grazing), corn silage, grass silage, hay, concentrate (Beet pulp: 30%, Wheat: 22.7%, Barley: 20%, Rapeseed meal: 15%, Non-GMO soybean meal: 7.9%, Cane molasses: 1.5%, Bi-calcium phosphorus: 1%, Trace elements vitamins: 0.9%, Dry magnesia: 0.5%, Salt: 0.5%)			None	None	None	():
SRS7821221		individual	shotgun	France, Saint-Gene-Champagnelle	Theix, INRAE	None	lactating cows		166578	48.0	grass(while grazing), corn silage, grass silage, hay, concentrate (Beet pulp: 30%, Wheat: 22.7%, Barley: 20%, Rapeseed meal: 15%, Non-GMO soybean meal: 7.9%, Cane molasses: 1.5%, Bi-calcium phosphorus: 1%, Trace elements vitamins: 0.9%, Dry magnesia: 0.5%, Salt: 0.5%)			None	None	None	():
SRS7821222		individual	shotgun	France, Saint-Gene-Champagnelle	Theix, INRAE	None	lactating cows		166552	48.0	grass(while grazing), corn silage, grass silage, hay, concentrate (Beet pulp: 30%, Wheat: 22.7%, Barley: 20%, Rapeseed meal: 15%, Non-GMO soybean meal: 7.9%, Cane molasses: 1.5%, Bi-calcium phosphorus: 1%, Trace elements vitamins: 0.9%, Dry magnesia: 0.5%, Salt: 0.5%)			None	None	None	():
SRS7821223		individual	shotgun	France, Saint-Gene-Champagnelle	Theix, INRAE	None	lactating cows		166554	48.0	grass(while grazing), corn silage, grass silage, hay, concentrate (Beet pulp: 30%, Wheat: 22.7%, Barley: 20%, Rapeseed meal: 15%, Non-GMO soybean meal: 7.9%, Cane molasses: 1.5%, Bi-calcium phosphorus: 1%, Trace elements vitamins: 0.9%, Dry magnesia: 0.5%, Salt: 0.5%)			None	None	None	():
SRS7821225		individual	shotgun	France, Saint-Gene-Champagnelle	Theix, INRAE	None	lactating cows		166556	48.0	grass(while grazing), corn silage, grass silage, hay, concentrate (Beet pulp: 30%, Wheat: 22.7%, Barley: 20%, Rapeseed meal: 15%, Non-GMO soybean meal: 7.9%, Cane molasses: 1.5%, Bi-calcium phosphorus: 1%, Trace elements vitamins: 0.9%, Dry magnesia: 0.5%, Salt: 0.5%)			None	None	None	():
SRS7821226		individual	shotgun	France, Saint-Gene-Champagnelle	Theix, INRAE	None	lactating cows		166560	48.0	grass(while grazing), corn silage, grass silage, hay, concentrate (Beet pulp: 30%, Wheat: 22.7%, Barley: 20%, Rapeseed meal: 15%, Non-GMO soybean meal: 7.9%, Cane molasses: 1.5%, Bi-calcium phosphorus: 1%, Trace elements vitamins: 0.9%, Dry magnesia: 0.5%, Salt: 0.5%)			None	None	None	():
SRS7821227		individual	shotgun	France, Saint-Gene-Champagnelle	Theix, INRAE	None	lactating cows		166570	48.0	grass(while grazing), corn silage, grass silage, hay, concentrate (Beet pulp: 30%, Wheat: 22.7%, Barley: 20%, Rapeseed meal: 15%, Non-GMO soybean meal: 7.9%, Cane molasses: 1.5%, Bi-calcium phosphorus: 1%, Trace elements vitamins: 0.9%, Dry magnesia: 0.5%, Salt: 0.5%)			None	None	None	():
SRS7821228		individual	shotgun	France, Saint-Gene-Champagnelle	Theix, INRAE	None	lactating cows		166574	48.0	grass(while grazing), corn silage, grass silage, hay, concentrate (Beet pulp: 30%, Wheat: 22.7%, Barley: 20%, Rapeseed meal: 15%, Non-GMO soybean meal: 7.9%, Cane molasses: 1.5%, Bi-calcium phosphorus: 1%, Trace elements vitamins: 0.9%, Dry magnesia: 0.5%, Salt: 0.5%)			None	None	None	():
SRS7821229		individual	shotgun	France, Saint-Gene-Champagnelle	Theix, INRAE	None	lactating cows		166549	48.0	grass(while grazing), corn silage, grass silage, hay, concentrate (Beet pulp: 30%, Wheat: 22.7%, Barley: 20%, Rapeseed meal: 15%, Non-GMO soybean meal: 7.9%, Cane molasses: 1.5%, Bi-calcium phosphorus: 1%, Trace elements vitamins: 0.9%, Dry magnesia: 0.5%, Salt: 0.5%)			None	None	None	():
SRS7821230		individual	shotgun	France, Saint-Gene-Champagnelle	Theix, INRAE	None	lactating cows		166583	48.0	grass(while grazing), corn silage, grass silage, hay, concentrate (Beet pulp: 30%, Wheat: 22.7%, Barley: 20%, Rapeseed meal: 15%, Non-GMO soybean meal: 7.9%, Cane molasses: 1.5%, Bi-calcium phosphorus: 1%, Trace elements vitamins: 0.9%, Dry magnesia: 0.5%, Salt: 0.5%)			None	None	None	():
SRS7821231		individual	shotgun	France, Saint-Gene-Champagnelle	Theix, INRAE	None	lactating cows		166639	48.0	grass(while grazing), corn silage, grass silage, hay, concentrate (Beet pulp: 30%, Wheat: 22.7%, Barley: 20%, Rapeseed meal: 15%, Non-GMO soybean meal: 7.9%, Cane molasses: 1.5%, Bi-calcium phosphorus: 1%, Trace elements vitamins: 0.9%, Dry magnesia: 0.5%, Salt: 0.5%)			None	None	None	():
SRS7821232		individual	shotgun	France, Saint-Gene-Champagnelle	Theix, INRAE	None	lactating cows		177603	36.0	grass(while grazing), corn silage, grass silage, hay, concentrate (Beet pulp: 30%, Wheat: 22.7%, Barley: 20%, Rapeseed meal: 15%, Non-GMO soybean meal: 7.9%, Cane molasses: 1.5%, Bi-calcium phosphorus: 1%, Trace elements vitamins: 0.9%, Dry magnesia: 0.5%, Salt: 0.5%)			None	None	None	():
SRS7821233		individual	shotgun	France, Saint-Gene-Champagnelle	Theix, INRAE	None	lactating cows		177611	36.0	grass(while grazing), corn silage, grass silage, hay, concentrate (Beet pulp: 30%, Wheat: 22.7%, Barley: 20%, Rapeseed meal: 15%, Non-GMO soybean meal: 7.9%, Cane molasses: 1.5%, Bi-calcium phosphorus: 1%, Trace elements vitamins: 0.9%, Dry magnesia: 0.5%, Salt: 0.5%)			None	None	None	():
SRS7821234		individual	shotgun	France, Saint-Gene-Champagnelle	Theix, INRAE	None	lactating cows		177615	36.0	grass(while grazing), corn silage, grass silage, hay, concentrate (Beet pulp: 30%, Wheat: 22.7%, Barley: 20%, Rapeseed meal: 15%, Non-GMO soybean meal: 7.9%, Cane molasses: 1.5%, Bi-calcium phosphorus: 1%, Trace elements vitamins: 0.9%, Dry magnesia: 0.5%, Salt: 0.5%)			None	None	None	():
SRS7821237		individual	shotgun	France, Saint-Gene-Champagnelle	Theix, INRAE	None	lactating cows		177630	36.0	grass(while grazing), corn silage, grass silage, hay, concentrate (Beet pulp: 30%, Wheat: 22.7%, Barley: 20%, Rapeseed meal: 15%, Non-GMO soybean meal: 7.9%, Cane molasses: 1.5%, Bi-calcium phosphorus: 1%, Trace elements vitamins: 0.9%, Dry magnesia: 0.5%, Salt: 0.5%)			None	None	None	():
SRS7821236		individual	shotgun	France, Saint-Gene-Champagnelle	Theix, INRAE	None	lactating cows		177642	36.0	grass(while grazing), corn silage, grass silage, hay, concentrate (Beet pulp: 30%, Wheat: 22.7%, Barley: 20%, Rapeseed meal: 15%, Non-GMO soybean meal: 7.9%, Cane molasses: 1.5%, Bi-calcium phosphorus: 1%, Trace elements vitamins: 0.9%, Dry magnesia: 0.5%, Salt: 0.5%)			None	None	None	():
SRS7821238		individual	shotgun	France, Saint-Gene-Champagnelle	Theix, INRAE	None	lactating cows		177646	36.0	grass(while grazing), corn silage, grass silage, hay, concentrate (Beet pulp: 30%, Wheat: 22.7%, Barley: 20%, Rapeseed meal: 15%, Non-GMO soybean meal: 7.9%, Cane molasses: 1.5%, Bi-calcium phosphorus: 1%, Trace elements vitamins: 0.9%, Dry magnesia: 0.5%, Salt: 0.5%)			None	None	None	():
SRS7821239		individual	shotgun	France, Saint-Gene-Champagnelle	Theix, INRAE	None	lactating cows		177650	36.0	grass(while grazing), corn silage, grass silage, hay, concentrate (Beet pulp: 30%, Wheat: 22.7%, Barley: 20%, Rapeseed meal: 15%, Non-GMO soybean meal: 7.9%, Cane molasses: 1.5%, Bi-calcium phosphorus: 1%, Trace elements vitamins: 0.9%, Dry magnesia: 0.5%, Salt: 0.5%)			None	None	None	():
SRS7821240		individual	shotgun	France, Saint-Gene-Champagnelle	Theix, INRAE	None	lactating cows		188053	24.0	grass(while grazing), corn silage, grass silage, hay, concentrate (Beet pulp: 30%, Wheat: 22.7%, Barley: 20%, Rapeseed meal: 15%, Non-GMO soybean meal: 7.9%, Cane molasses: 1.5%, Bi-calcium phosphorus: 1%, Trace elements vitamins: 0.9%, Dry magnesia: 0.5%, Salt: 0.5%)			None	None	None	():
SRS7821241		individual	shotgun	France, Saint-Gene-Champagnelle	Theix, INRAE	None	lactating cows		XX7653	36.0	grass(while grazing), corn silage, grass silage, hay, concentrate (Beet pulp: 30%, Wheat: 22.7%, Barley: 20%, Rapeseed meal: 15%, Non-GMO soybean meal: 7.9%, Cane molasses: 1.5%, Bi-calcium phosphorus: 1%, Trace elements vitamins: 0.9%, Dry magnesia: 0.5%, Salt: 0.5%)			None	None	None	():
SRS7821242		individual	shotgun	France, Saint-Gene-Champagnelle	Theix, INRAE	None	lactating cows		144911	72.0	grass(while grazing), corn silage, grass silage, hay, concentrate (Beet pulp: 30%, Wheat: 22.7%, Barley: 20%, Rapeseed meal: 15%, Non-GMO soybean meal: 7.9%, Cane molasses: 1.5%, Bi-calcium phosphorus: 1%, Trace elements vitamins: 0.9%, Dry magnesia: 0.5%, Salt: 0.5%)			None	None	None	():
SRS7821243		individual	shotgun	France, Saint-Gene-Champagnelle	Theix, INRAE	None	lactating cows		144940	72.0	grass(while grazing), corn silage, grass silage, hay, concentrate (Beet pulp: 30%, Wheat: 22.7%, Barley: 20%, Rapeseed meal: 15%, Non-GMO soybean meal: 7.9%, Cane molasses: 1.5%, Bi-calcium phosphorus: 1%, Trace elements vitamins: 0.9%, Dry magnesia: 0.5%, Salt: 0.5%)			None	None	None	():
SRS7821244		individual	shotgun	France, Saint-Gene-Champagnelle	Theix, INRAE	None	lactating cows		155434	60.0	grass(while grazing), corn silage, grass silage, hay, concentrate (Beet pulp: 30%, Wheat: 22.7%, Barley: 20%, Rapeseed meal: 15%, Non-GMO soybean meal: 7.9%, Cane molasses: 1.5%, Bi-calcium phosphorus: 1%, Trace elements vitamins: 0.9%, Dry magnesia: 0.5%, Salt: 0.5%)			None	None	None	():
SRS7821245		individual	shotgun	France, Saint-Gene-Champagnelle	Theix, INRAE	None	lactating cows		155459	60.0	grass(while grazing), corn silage, grass silage, hay, concentrate (Beet pulp: 30%, Wheat: 22.7%, Barley: 20%, Rapeseed meal: 15%, Non-GMO soybean meal: 7.9%, Cane molasses: 1.5%, Bi-calcium phosphorus: 1%, Trace elements vitamins: 0.9%, Dry magnesia: 0.5%, Salt: 0.5%)			None	None	None	():
SRS7821247		individual	shotgun	France, Saint-Gene-Champagnelle	Theix, INRAE	None	lactating cows		166543	48.0	grass(while grazing), corn silage, grass silage, hay, concentrate (Beet pulp: 30%, Wheat: 22.7%, Barley: 20%, Rapeseed meal: 15%, Non-GMO soybean meal: 7.9%, Cane molasses: 1.5%, Bi-calcium phosphorus: 1%, Trace elements vitamins: 0.9%, Dry magnesia: 0.5%, Salt: 0.5%)			None	None	None	():
SRS7821248		individual	shotgun	France, Saint-Gene-Champagnelle	Theix, INRAE	None	lactating cows		166545	48.0	grass(while grazing), corn silage, grass silage, hay, concentrate (Beet pulp: 30%, Wheat: 22.7%, Barley: 20%, Rapeseed meal: 15%, Non-GMO soybean meal: 7.9%, Cane molasses: 1.5%, Bi-calcium phosphorus: 1%, Trace elements vitamins: 0.9%, Dry magnesia: 0.5%, Salt: 0.5%)			None	None	None	():
SRS7821249		individual	shotgun	France, Saint-Gene-Champagnelle	Theix, INRAE	None	lactating cows		166565	48.0	grass(while grazing), corn silage, grass silage, hay, concentrate (Beet pulp: 30%, Wheat: 22.7%, Barley: 20%, Rapeseed meal: 15%, Non-GMO soybean meal: 7.9%, Cane molasses: 1.5%, Bi-calcium phosphorus: 1%, Trace elements vitamins: 0.9%, Dry magnesia: 0.5%, Salt: 0.5%)			None	None	None	():
SRS7821250		individual	shotgun	France, Saint-Gene-Champagnelle	Theix, INRAE	None	lactating cows		166588	48.0	grass(while grazing), corn silage, grass silage, hay, concentrate (Beet pulp: 30%, Wheat: 22.7%, Barley: 20%, Rapeseed meal: 15%, Non-GMO soybean meal: 7.9%, Cane molasses: 1.5%, Bi-calcium phosphorus: 1%, Trace elements vitamins: 0.9%, Dry magnesia: 0.5%, Salt: 0.5%)			None	None	None	():
SRS7821251		individual	shotgun	France, Saint-Gene-Champagnelle	Theix, INRAE	None	lactating cows		177616	36.0	grass(while grazing), corn silage, grass silage, hay, concentrate (Beet pulp: 30%, Wheat: 22.7%, Barley: 20%, Rapeseed meal: 15%, Non-GMO soybean meal: 7.9%, Cane molasses: 1.5%, Bi-calcium phosphorus: 1%, Trace elements vitamins: 0.9%, Dry magnesia: 0.5%, Salt: 0.5%)			None	None	None	():
SRS7821252		individual	shotgun	France, Saint-Gene-Champagnelle	Theix, INRAE	None	lactating cows		177618	36.0	grass(while grazing), corn silage, grass silage, hay, concentrate (Beet pulp: 30%, Wheat: 22.7%, Barley: 20%, Rapeseed meal: 15%, Non-GMO soybean meal: 7.9%, Cane molasses: 1.5%, Bi-calcium phosphorus: 1%, Trace elements vitamins: 0.9%, Dry magnesia: 0.5%, Salt: 0.5%)			None	None	None	():
SRS7821253		individual	shotgun	France, Saint-Gene-Champagnelle	Theix, INRAE	None	lactating cows		188066	24.0	grass(while grazing), corn silage, grass silage, hay, concentrate (Beet pulp: 30%, Wheat: 22.7%, Barley: 20%, Rapeseed meal: 15%, Non-GMO soybean meal: 7.9%, Cane molasses: 1.5%, Bi-calcium phosphorus: 1%, Trace elements vitamins: 0.9%, Dry magnesia: 0.5%, Salt: 0.5%)			None	None	None	():
SRS7821254		individual	shotgun	France, Saint-Gene-Champagnelle	Theix, INRAE	None	lactating cows		177654	36.0	grass(while grazing), corn silage, grass silage, hay, concentrate (Beet pulp: 30%, Wheat: 22.7%, Barley: 20%, Rapeseed meal: 15%, Non-GMO soybean meal: 7.9%, Cane molasses: 1.5%, Bi-calcium phosphorus: 1%, Trace elements vitamins: 0.9%, Dry magnesia: 0.5%, Salt: 0.5%)			None	None	None	():
SRS8213859		individual	shotgun	France, Saint-Gene-Champagnelle	Theix, INRAE	None	lactating cows		144888	72.0	corn silage, grass silage, hay, soybean meal, concentrate (Beet pulp: 30%, Wheat: 22.7%, Barley: 20%, Rapeseed meal: 15%, Non-GMO soybean meal: 7.9%, Cane molasses: 1.5%, Bi-calcium phosphorus: 1%, Trace elements vitamins: 0.9%, Dry magnesia: 0.5%, Salt: 0.5%)			None	None	None	():
SRS8213860		individual	shotgun	France, Saint-Gene-Champagnelle	Theix, INRAE	None	lactating cows		144900	72.0	corn silage, grass silage, hay, soybean meal, concentrate (Beet pulp: 30%, Wheat: 22.7%, Barley: 20%, Rapeseed meal: 15%, Non-GMO soybean meal: 7.9%, Cane molasses: 1.5%, Bi-calcium phosphorus: 1%, Trace elements vitamins: 0.9%, Dry magnesia: 0.5%, Salt: 0.5%)			None	None	None	():
SRS8213871		individual	shotgun	France, Saint-Gene-Champagnelle	Theix, INRAE	None	lactating cows		144910	72.0	corn silage, grass silage, hay, soybean meal, concentrate (Beet pulp: 30%, Wheat: 22.7%, Barley: 20%, Rapeseed meal: 15%, Non-GMO soybean meal: 7.9%, Cane molasses: 1.5%, Bi-calcium phosphorus: 1%, Trace elements vitamins: 0.9%, Dry magnesia: 0.5%, Salt: 0.5%)			None	None	None	():
SRS8213874		individual	shotgun	France, Saint-Gene-Champagnelle	Theix, INRAE	None	lactating cows		144923	72.0	corn silage, grass silage, hay, soybean meal, concentrate (Beet pulp: 30%, Wheat: 22.7%, Barley: 20%, Rapeseed meal: 15%, Non-GMO soybean meal: 7.9%, Cane molasses: 1.5%, Bi-calcium phosphorus: 1%, Trace elements vitamins: 0.9%, Dry magnesia: 0.5%, Salt: 0.5%)			None	None	None	():
SRS8213875		individual	shotgun	France, Saint-Gene-Champagnelle	Theix, INRAE	None	lactating cows		155455	60.0	corn silage, grass silage, hay, soybean meal, concentrate (Beet pulp: 30%, Wheat: 22.7%, Barley: 20%, Rapeseed meal: 15%, Non-GMO soybean meal: 7.9%, Cane molasses: 1.5%, Bi-calcium phosphorus: 1%, Trace elements vitamins: 0.9%, Dry magnesia: 0.5%, Salt: 0.5%)			None	None	None	():
SRS8213876		individual	shotgun	France, Saint-Gene-Champagnelle	Theix, INRAE	None	lactating cows		155459	60.0	corn silage, grass silage, hay, soybean meal, concentrate (Beet pulp: 30%, Wheat: 22.7%, Barley: 20%, Rapeseed meal: 15%, Non-GMO soybean meal: 7.9%, Cane molasses: 1.5%, Bi-calcium phosphorus: 1%, Trace elements vitamins: 0.9%, Dry magnesia: 0.5%, Salt: 0.5%)			None	None	None	():
SRS8213877		individual	shotgun	France, Saint-Gene-Champagnelle	Theix, INRAE	None	lactating cows		155626	60.0	corn silage, grass silage, hay, soybean meal, concentrate (Beet pulp: 30%, Wheat: 22.7%, Barley: 20%, Rapeseed meal: 15%, Non-GMO soybean meal: 7.9%, Cane molasses: 1.5%, Bi-calcium phosphorus: 1%, Trace elements vitamins: 0.9%, Dry magnesia: 0.5%, Salt: 0.5%)			None	None	None	():
SRS8213878		individual	shotgun	France, Saint-Gene-Champagnelle	Theix, INRAE	None	lactating cows		166543	48.0	corn silage, grass silage, hay, soybean meal, concentrate (Beet pulp: 30%, Wheat: 22.7%, Barley: 20%, Rapeseed meal: 15%, Non-GMO soybean meal: 7.9%, Cane molasses: 1.5%, Bi-calcium phosphorus: 1%, Trace elements vitamins: 0.9%, Dry magnesia: 0.5%, Salt: 0.5%)			None	None	None	():
SRS8213879		individual	shotgun	France, Saint-Gene-Champagnelle	Theix, INRAE	None	lactating cows		166560	48.0	corn silage, grass silage, hay, soybean meal, concentrate (Beet pulp: 30%, Wheat: 22.7%, Barley: 20%, Rapeseed meal: 15%, Non-GMO soybean meal: 7.9%, Cane molasses: 1.5%, Bi-calcium phosphorus: 1%, Trace elements vitamins: 0.9%, Dry magnesia: 0.5%, Salt: 0.5%)			None	None	None	():
SRS8213880		individual	shotgun	France, Saint-Gene-Champagnelle	Theix, INRAE	None	lactating cows		166565	48.0	corn silage, grass silage, hay, soybean meal, concentrate (Beet pulp: 30%, Wheat: 22.7%, Barley: 20%, Rapeseed meal: 15%, Non-GMO soybean meal: 7.9%, Cane molasses: 1.5%, Bi-calcium phosphorus: 1%, Trace elements vitamins: 0.9%, Dry magnesia: 0.5%, Salt: 0.5%)			None	None	None	():
SRS8213861		individual	shotgun	France, Saint-Gene-Champagnelle	Theix, INRAE	None	lactating cows		166570	48.0	corn silage, grass silage, hay, soybean meal, concentrate (Beet pulp: 30%, Wheat: 22.7%, Barley: 20%, Rapeseed meal: 15%, Non-GMO soybean meal: 7.9%, Cane molasses: 1.5%, Bi-calcium phosphorus: 1%, Trace elements vitamins: 0.9%, Dry magnesia: 0.5%, Salt: 0.5%)			None	None	None	():
SRS8213862		individual	shotgun	France, Saint-Gene-Champagnelle	Theix, INRAE	None	lactating cows		166574	48.0	corn silage, grass silage, hay, soybean meal, concentrate (Beet pulp: 30%, Wheat: 22.7%, Barley: 20%, Rapeseed meal: 15%, Non-GMO soybean meal: 7.9%, Cane molasses: 1.5%, Bi-calcium phosphorus: 1%, Trace elements vitamins: 0.9%, Dry magnesia: 0.5%, Salt: 0.5%)			None	None	None	():
SRS8213863		individual	shotgun	France, Saint-Gene-Champagnelle	Theix, INRAE	None	lactating cows		166583	48.0	corn silage, grass silage, hay, soybean meal, concentrate (Beet pulp: 30%, Wheat: 22.7%, Barley: 20%, Rapeseed meal: 15%, Non-GMO soybean meal: 7.9%, Cane molasses: 1.5%, Bi-calcium phosphorus: 1%, Trace elements vitamins: 0.9%, Dry magnesia: 0.5%, Salt: 0.5%)			None	None	None	():
SRS8213864		individual	shotgun	France, Saint-Gene-Champagnelle	Theix, INRAE	None	lactating cows		166639	48.0	corn silage, grass silage, hay, soybean meal, concentrate (Beet pulp: 30%, Wheat: 22.7%, Barley: 20%, Rapeseed meal: 15%, Non-GMO soybean meal: 7.9%, Cane molasses: 1.5%, Bi-calcium phosphorus: 1%, Trace elements vitamins: 0.9%, Dry magnesia: 0.5%, Salt: 0.5%)			None	None	None	():
SRS8213865		individual	shotgun	France, Saint-Gene-Champagnelle	Theix, INRAE	None	lactating cows		177603	36.0	corn silage, grass silage, hay, soybean meal, concentrate (Beet pulp: 30%, Wheat: 22.7%, Barley: 20%, Rapeseed meal: 15%, Non-GMO soybean meal: 7.9%, Cane molasses: 1.5%, Bi-calcium phosphorus: 1%, Trace elements vitamins: 0.9%, Dry magnesia: 0.5%, Salt: 0.5%)			None	None	None	():
SRS8213866		individual	shotgun	France, Saint-Gene-Champagnelle	Theix, INRAE	None	lactating cows		177611	36.0	corn silage, grass silage, hay, soybean meal, concentrate (Beet pulp: 30%, Wheat: 22.7%, Barley: 20%, Rapeseed meal: 15%, Non-GMO soybean meal: 7.9%, Cane molasses: 1.5%, Bi-calcium phosphorus: 1%, Trace elements vitamins: 0.9%, Dry magnesia: 0.5%, Salt: 0.5%)			None	None	None	():
SRS8213867		individual	shotgun	France, Saint-Gene-Champagnelle	Theix, INRAE	None	lactating cows		166552	48.0	corn silage, grass silage, hay, soybean meal, concentrate (Beet pulp: 30%, Wheat: 22.7%, Barley: 20%, Rapeseed meal: 15%, Non-GMO soybean meal: 7.9%, Cane molasses: 1.5%, Bi-calcium phosphorus: 1%, Trace elements vitamins: 0.9%, Dry magnesia: 0.5%, Salt: 0.5%)			None	None	None	():
SRS8213868		individual	shotgun	France, Saint-Gene-Champagnelle	Theix, INRAE	None	lactating cows		177618	36.0	corn silage, grass silage, hay, soybean meal, concentrate (Beet pulp: 30%, Wheat: 22.7%, Barley: 20%, Rapeseed meal: 15%, Non-GMO soybean meal: 7.9%, Cane molasses: 1.5%, Bi-calcium phosphorus: 1%, Trace elements vitamins: 0.9%, Dry magnesia: 0.5%, Salt: 0.5%)			None	None	None	():
SRS8213869		individual	shotgun	France, Saint-Gene-Champagnelle	Theix, INRAE	None	lactating cows		177642	36.0	corn silage, grass silage, hay, soybean meal, concentrate (Beet pulp: 30%, Wheat: 22.7%, Barley: 20%, Rapeseed meal: 15%, Non-GMO soybean meal: 7.9%, Cane molasses: 1.5%, Bi-calcium phosphorus: 1%, Trace elements vitamins: 0.9%, Dry magnesia: 0.5%, Salt: 0.5%)			None	None	None	():
SRS8213870		individual	shotgun	France, Saint-Gene-Champagnelle	Theix, INRAE	None	lactating cows		177650	36.0	corn silage, grass silage, hay, soybean meal, concentrate (Beet pulp: 30%, Wheat: 22.7%, Barley: 20%, Rapeseed meal: 15%, Non-GMO soybean meal: 7.9%, Cane molasses: 1.5%, Bi-calcium phosphorus: 1%, Trace elements vitamins: 0.9%, Dry magnesia: 0.5%, Salt: 0.5%)			None	None	None	():
SRS8213872		individual	shotgun	France, Saint-Gene-Champagnelle	Theix, INRAE	None	lactating cows		XX7653	36.0	corn silage, grass silage, hay, soybean meal, concentrate (Beet pulp: 30%, Wheat: 22.7%, Barley: 20%, Rapeseed meal: 15%, Non-GMO soybean meal: 7.9%, Cane molasses: 1.5%, Bi-calcium phosphorus: 1%, Trace elements vitamins: 0.9%, Dry magnesia: 0.5%, Salt: 0.5%)			None	None	None	():
SRS8213873		individual	shotgun	France, Saint-Gene-Champagnelle	Theix, INRAE	None	lactating cows		188066	24.0	corn silage, grass silage, hay, soybean meal, concentrate (Beet pulp: 30%, Wheat: 22.7%, Barley: 20%, Rapeseed meal: 15%, Non-GMO soybean meal: 7.9%, Cane molasses: 1.5%, Bi-calcium phosphorus: 1%, Trace elements vitamins: 0.9%, Dry magnesia: 0.5%, Salt: 0.5%)			None	None	None	():
Run accession	Bioproject	Sample type	Data type	Location	Farm name	Farm size	Animal	Antibiotics	Host	Age	Diet	FBP detected	Target region 16S	Number of samples	Number of animals	Sample date	Publication

ERR3393558

individual

shotgun

Korea

A

100

lactating cows

uniq1245

62.0

cow diet

None

March 24, 1900

Lim SK et al. (2020): Antibiotic resistomes discovered in the gut microbiomes of Korean swine and cattle

ERR3393565

individual

shotgun

Korea

A

100

M

uniq1246

19.0

steer-concentrate

None

March 24, 1900

Lim SK et al. (2020): Antibiotic resistomes discovered in the gut microbiomes of Korean swine and cattle

ERR3393574

individual

shotgun

Korea

A

100

M

uniq1247

18.0

steer-concentrate

None

March 24, 1900

Lim SK et al. (2020): Antibiotic resistomes discovered in the gut microbiomes of Korean swine and cattle

ERR3393549

individual

shotgun

Korea

B

106

M

uniq1248

22.0

steer-concentrate

None

March 24, 1900

Lim SK et al. (2020): Antibiotic resistomes discovered in the gut microbiomes of Korean swine and cattle

ERR3393553

individual

shotgun

Korea

B

106

M

uniq1249

24.0

steer-concentrate

None

March 24, 1900

Lim SK et al. (2020): Antibiotic resistomes discovered in the gut microbiomes of Korean swine and cattle

ERR3393557

individual

shotgun

Korea

B

106

M

uniq1250

25.0

steer-concentrate

None

March 24, 1900

Lim SK et al. (2020): Antibiotic resistomes discovered in the gut microbiomes of Korean swine and cattle

ERR3393559

individual

shotgun

Korea

C

162

lactating cows

uniq1251

42.0

cow diet

None

March 24, 1900

Lim SK et al. (2020): Antibiotic resistomes discovered in the gut microbiomes of Korean swine and cattle

ERR3393560

individual

shotgun

Korea

C

162

lactating cows

uniq1252

69.0

cow diet

None

March 24, 1900

Lim SK et al. (2020): Antibiotic resistomes discovered in the gut microbiomes of Korean swine and cattle

ERR3393561

individual

shotgun

Korea

C

162

lactating cows

uniq1253

36.0

cow diet

None

March 24, 1900

Lim SK et al. (2020): Antibiotic resistomes discovered in the gut microbiomes of Korean swine and cattle

ERR3393562

individual

shotgun

Korea

D

130

lactating cows

uniq1254

30.0

cow diet

None

March 24, 1900

Lim SK et al. (2020): Antibiotic resistomes discovered in the gut microbiomes of Korean swine and cattle

ERR3393563

individual

shotgun

Korea

D

130

lactating cows

uniq1255

40.0

cow diet

None

March 24, 1900

Lim SK et al. (2020): Antibiotic resistomes discovered in the gut microbiomes of Korean swine and cattle

ERR3393564

individual

shotgun

Korea

D

130

lactating cows

uniq1256

60.0

cow diet

None

March 24, 1900

Lim SK et al. (2020): Antibiotic resistomes discovered in the gut microbiomes of Korean swine and cattle

ERR3393566

individual

shotgun

Korea

E

35

lactating cows

uniq1257

25.0

cow diet

None

March 24, 1900

Lim SK et al. (2020): Antibiotic resistomes discovered in the gut microbiomes of Korean swine and cattle

ERR3393567

individual

shotgun

Korea

E

35

M

uniq1258

45.0

steer-concentrate

None

March 24, 1900

Lim SK et al. (2020): Antibiotic resistomes discovered in the gut microbiomes of Korean swine and cattle

ERR3393568

individual

shotgun

Korea

E

35

M

uniq1259

48.0

steer-concentrate

None

March 24, 1900

Lim SK et al. (2020): Antibiotic resistomes discovered in the gut microbiomes of Korean swine and cattle

ERR3393569

individual

shotgun

Korea

E

35

uniq1260

None

March 24, 1900

Lim SK et al. (2020): Antibiotic resistomes discovered in the gut microbiomes of Korean swine and cattle

ERR3393570

individual

shotgun

Korea

F

350

lactating cows

uniq1261

25.0

cow diet

None

March 24, 1900

Lim SK et al. (2020): Antibiotic resistomes discovered in the gut microbiomes of Korean swine and cattle

ERR3393571

individual

shotgun

Korea

F

350

lactating cows

uniq1262

25.0

cow diet

None

March 24, 1900

Lim SK et al. (2020): Antibiotic resistomes discovered in the gut microbiomes of Korean swine and cattle

ERR3393572

individual

shotgun

Korea

F

350

lactating cows

uniq1263

22.0

cow diet

None

March 24, 1900

Lim SK et al. (2020): Antibiotic resistomes discovered in the gut microbiomes of Korean swine and cattle

ERR3393573

individual

shotgun

Korea

G

198

lactating cows

uniq1264

26.0

cow diet

None

March 24, 1900

Lim SK et al. (2020): Antibiotic resistomes discovered in the gut microbiomes of Korean swine and cattle

ERR3393575

individual

shotgun

Korea

G

198

M

uniq1265

25.0

steer-concentrate

None

March 24, 1900

Lim SK et al. (2020): Antibiotic resistomes discovered in the gut microbiomes of Korean swine and cattle

ERR3393576

individual

shotgun

Korea

G

198

M

uniq1266

24.0

steer-concentrate

None

March 24, 1900

Lim SK et al. (2020): Antibiotic resistomes discovered in the gut microbiomes of Korean swine and cattle

ERR3393577

individual

shotgun

Korea

G

198

uniq1267

None

March 24, 1900

Lim SK et al. (2020): Antibiotic resistomes discovered in the gut microbiomes of Korean swine and cattle

ERR3393578

individual

shotgun

Korea

H

40

lactating cows

uniq1268

50.0

cow diet

None

March 24, 1900

Lim SK et al. (2020): Antibiotic resistomes discovered in the gut microbiomes of Korean swine and cattle

ERR3393579

individual

shotgun

Korea

H

40

lactating cows

uniq1269

90.0

cow diet

None

March 24, 1900

Lim SK et al. (2020): Antibiotic resistomes discovered in the gut microbiomes of Korean swine and cattle

ERR3393580

individual

shotgun

Korea

H

40

lactating cows

uniq1270

70.0

cow diet

None

March 24, 1900

Lim SK et al. (2020): Antibiotic resistomes discovered in the gut microbiomes of Korean swine and cattle

ERR3393581

individual

shotgun

Korea

I

350

lactating cows

uniq1271

22.0

cow diet

None

March 24, 1900

Lim SK et al. (2020): Antibiotic resistomes discovered in the gut microbiomes of Korean swine and cattle

ERR3393582

individual

shotgun

Korea

I

350

M

uniq1272

23.0

steer-concentrate

None

March 24, 1900

Lim SK et al. (2020): Antibiotic resistomes discovered in the gut microbiomes of Korean swine and cattle

ERR3393583

individual

shotgun

Korea

I

350

M

uniq1273

27.0

steer-concentrate

None

March 24, 1900

Lim SK et al. (2020): Antibiotic resistomes discovered in the gut microbiomes of Korean swine and cattle

ERR3393584

individual

shotgun

Korea

J

98

M

uniq1274

23.0

steer-concentrate

None

March 24, 1900

Lim SK et al. (2020): Antibiotic resistomes discovered in the gut microbiomes of Korean swine and cattle

ERR3393585

individual

shotgun

Korea

J

98

M

uniq1275

28.0

steer-concentrate

None

March 24, 1900

Lim SK et al. (2020): Antibiotic resistomes discovered in the gut microbiomes of Korean swine and cattle

ERR3393586

individual

shotgun

Korea

J

98

M

uniq1276

28.0

steer-concentrate

None

March 24, 1900

Lim SK et al. (2020): Antibiotic resistomes discovered in the gut microbiomes of Korean swine and cattle

ERR3393546

individual

shotgun

Korea

K

109

M

uniq1277

27.0

steer-concentrate

None

March 24, 1900

Lim SK et al. (2020): Antibiotic resistomes discovered in the gut microbiomes of Korean swine and cattle

ERR3393547

individual

shotgun

Korea

K

109

M

uniq1278

27.0

steer-concentrate

None

March 24, 1900

Lim SK et al. (2020): Antibiotic resistomes discovered in the gut microbiomes of Korean swine and cattle

ERR3393548

individual

shotgun

Korea

K

109

M

uniq1279

29.0

steer-concentrate

None

March 24, 1900

Lim SK et al. (2020): Antibiotic resistomes discovered in the gut microbiomes of Korean swine and cattle

ERR3393550

individual

shotgun

Korea

L

93

M

uniq1280

27.0

steer-concentrate

None

March 24, 1900

Lim SK et al. (2020): Antibiotic resistomes discovered in the gut microbiomes of Korean swine and cattle

ERR3393551

individual

shotgun

Korea

L

93

M

uniq1281

29.0

steer-concentrate

None

March 24, 1900

Lim SK et al. (2020): Antibiotic resistomes discovered in the gut microbiomes of Korean swine and cattle

ERR3393552

individual

shotgun

Korea

L

93

M

uniq1282

33.0

steer-concentrate

None

March 24, 1900

Lim SK et al. (2020): Antibiotic resistomes discovered in the gut microbiomes of Korean swine and cattle

ERR3393554

individual

shotgun

Korea

M

15

M

uniq1283

31.0

steer-concentrate

None

March 24, 1900

Lim SK et al. (2020): Antibiotic resistomes discovered in the gut microbiomes of Korean swine and cattle

ERR3393555

individual

shotgun

Korea

M

15

M

uniq1284

30.0

steer-concentrate

None

March 24, 1900

Lim SK et al. (2020): Antibiotic resistomes discovered in the gut microbiomes of Korean swine and cattle

ERR3393556

individual

shotgun

Korea

M

15

M

uniq1285

32.0

steer-concentrate

None

March 24, 1900

Lim SK et al. (2020): Antibiotic resistomes discovered in the gut microbiomes of Korean swine and cattle

SRR7686592

individual

shotgun

Pennsylvania, US

None

lactating cows

None

cow diet

None

Serajus Salaheen et al. (2019): Metagenomic analysis of the fecal microbiomes from Escherichia coli O157:H7-shedding and non-shedding cows on a single dairy farm

SRR7686593

individual

shotgun

Pennsylvania, US

None

lactating cows

None

cow diet

None

Serajus Salaheen et al. (2019): Metagenomic analysis of the fecal microbiomes from Escherichia coli O157:H7-shedding and non-shedding cows on a single dairy farm

SRR7686594

individual

shotgun

Pennsylvania, US

None

lactating cows

None

cow diet

None

Serajus Salaheen et al. (2019): Metagenomic analysis of the fecal microbiomes from Escherichia coli O157:H7-shedding and non-shedding cows on a single dairy farm

SRR7686595

individual

shotgun

Pennsylvania, US

None

lactating cows

None

cow diet

None

Serajus Salaheen et al. (2019): Metagenomic analysis of the fecal microbiomes from Escherichia coli O157:H7-shedding and non-shedding cows on a single dairy farm

SRR7686596

individual

shotgun

Pennsylvania, US

None

lactating cows

None

cow diet

None

Serajus Salaheen et al. (2019): Metagenomic analysis of the fecal microbiomes from Escherichia coli O157:H7-shedding and non-shedding cows on a single dairy farm

SRR7686597

individual

shotgun

Pennsylvania, US

None

lactating cows

None

cow diet

None

Serajus Salaheen et al. (2019): Metagenomic analysis of the fecal microbiomes from Escherichia coli O157:H7-shedding and non-shedding cows on a single dairy farm

SRR7686598

individual

shotgun

Pennsylvania, US

None

lactating cows

uniq1292

None

cow diet

None

Serajus Salaheen et al. (2019): Metagenomic analysis of the fecal microbiomes from Escherichia coli O157:H7-shedding and non-shedding cows on a single dairy farm

SRR7686599

individual

shotgun

Pennsylvania, US

None

lactating cows

uniq1293

None

cow diet

None

Serajus Salaheen et al. (2019): Metagenomic analysis of the fecal microbiomes from Escherichia coli O157:H7-shedding and non-shedding cows on a single dairy farm

SRR7686600

individual

shotgun

Pennsylvania, US

None

lactating cows

None

cow diet

None

Serajus Salaheen et al. (2019): Metagenomic analysis of the fecal microbiomes from Escherichia coli O157:H7-shedding and non-shedding cows on a single dairy farm

SRR7686601

individual

shotgun

Pennsylvania, US

None

lactating cows

uniq1295

None

cow diet

None

Serajus Salaheen et al. (2019): Metagenomic analysis of the fecal microbiomes from Escherichia coli O157:H7-shedding and non-shedding cows on a single dairy farm

SRR7686602

individual

shotgun

Pennsylvania, US

None

lactating cows

uniq1296

None

cow diet

None

Serajus Salaheen et al. (2019): Metagenomic analysis of the fecal microbiomes from Escherichia coli O157:H7-shedding and non-shedding cows on a single dairy farm

SRR7686603

individual

shotgun

Pennsylvania, US

None

lactating cows

None

cow diet

None

Serajus Salaheen et al. (2019): Metagenomic analysis of the fecal microbiomes from Escherichia coli O157:H7-shedding and non-shedding cows on a single dairy farm

SRR7686604

individual

shotgun

Pennsylvania, US

None

lactating cows

None

cow diet

None

Serajus Salaheen et al. (2019): Metagenomic analysis of the fecal microbiomes from Escherichia coli O157:H7-shedding and non-shedding cows on a single dairy farm

SRR7686605

individual

shotgun

Pennsylvania, US

None

lactating cows

None

cow diet

None

Serajus Salaheen et al. (2019): Metagenomic analysis of the fecal microbiomes from Escherichia coli O157:H7-shedding and non-shedding cows on a single dairy farm

SRR3181106

individual

shotgun

Texas, US

None

lees than 2yo steer

11

18.0

corn-based

None

Doster E et al. (2018): Investigating Effects of Tulathromycin Metaphylaxis on the Fecal Resistome and Microbiome of Commercial Feedlot Cattle Early in the Feeding Period

SRR3185498

individual

shotgun

Texas, US

None

lees than 2yo steer

11

18.0

corn-based

None

Doster E et al. (2018): Investigating Effects of Tulathromycin Metaphylaxis on the Fecal Resistome and Microbiome of Commercial Feedlot Cattle Early in the Feeding Period

SRR3181136

individual

shotgun

Texas, US

None

lees than 2yo steer

tulathromycin injection

11

18.0

corn-based

None

Doster E et al. (2018): Investigating Effects of Tulathromycin Metaphylaxis on the Fecal Resistome and Microbiome of Commercial Feedlot Cattle Early in the Feeding Period

SRR3181107

individual

shotgun

Texas, US

None

lees than 2yo steer

37

18.0

corn-based

None

Doster E et al. (2018): Investigating Effects of Tulathromycin Metaphylaxis on the Fecal Resistome and Microbiome of Commercial Feedlot Cattle Early in the Feeding Period

SRR3181137

individual

shotgun

Texas, US

None

lees than 2yo steer

tulathromycin injection

37

18.0

corn-based

None

Doster E et al. (2018): Investigating Effects of Tulathromycin Metaphylaxis on the Fecal Resistome and Microbiome of Commercial Feedlot Cattle Early in the Feeding Period

SRR3181108

individual

shotgun

Texas, US

None

lees than 2yo steer

51

18.0

corn-based

None

Doster E et al. (2018): Investigating Effects of Tulathromycin Metaphylaxis on the Fecal Resistome and Microbiome of Commercial Feedlot Cattle Early in the Feeding Period

SRR3181138

individual

shotgun

Texas, US

None

lees than 2yo steer

tulathromycin injection

51

18.0

corn-based

None

Doster E et al. (2018): Investigating Effects of Tulathromycin Metaphylaxis on the Fecal Resistome and Microbiome of Commercial Feedlot Cattle Early in the Feeding Period

SRR3181109

individual

shotgun

Texas, US

None

lees than 2yo steer

62

18.0

corn-based

None

Doster E et al. (2018): Investigating Effects of Tulathromycin Metaphylaxis on the Fecal Resistome and Microbiome of Commercial Feedlot Cattle Early in the Feeding Period

SRR3181139

individual

shotgun

Texas, US

None

lees than 2yo steer

tulathromycin injection

62

18.0

corn-based

None

Doster E et al. (2018): Investigating Effects of Tulathromycin Metaphylaxis on the Fecal Resistome and Microbiome of Commercial Feedlot Cattle Early in the Feeding Period

SRR3181110

individual

shotgun

Texas, US

None

lees than 2yo steer

83

18.0

corn-based

None

Doster E et al. (2018): Investigating Effects of Tulathromycin Metaphylaxis on the Fecal Resistome and Microbiome of Commercial Feedlot Cattle Early in the Feeding Period

SRR3181140

individual

shotgun

Texas, US

None

lees than 2yo steer

tulathromycin injection

83

18.0

corn-based

None

Doster E et al. (2018): Investigating Effects of Tulathromycin Metaphylaxis on the Fecal Resistome and Microbiome of Commercial Feedlot Cattle Early in the Feeding Period

SRR3181111

individual

shotgun

Texas, US

None

lees than 2yo steer

84

18.0

corn-based

None

Doster E et al. (2018): Investigating Effects of Tulathromycin Metaphylaxis on the Fecal Resistome and Microbiome of Commercial Feedlot Cattle Early in the Feeding Period

SRR3181141

individual

shotgun

Texas, US

None

lees than 2yo steer

tulathromycin injection

84

18.0

corn-based

None

Doster E et al. (2018): Investigating Effects of Tulathromycin Metaphylaxis on the Fecal Resistome and Microbiome of Commercial Feedlot Cattle Early in the Feeding Period

SRR3181112

individual

shotgun

Texas, US

None

lees than 2yo steer

92

18.0

corn-based

None

Doster E et al. (2018): Investigating Effects of Tulathromycin Metaphylaxis on the Fecal Resistome and Microbiome of Commercial Feedlot Cattle Early in the Feeding Period

SRR3181142

individual

shotgun

Texas, US

None

lees than 2yo steer

tulathromycin injection

92

18.0

corn-based

None

Doster E et al. (2018): Investigating Effects of Tulathromycin Metaphylaxis on the Fecal Resistome and Microbiome of Commercial Feedlot Cattle Early in the Feeding Period

SRR3181113

individual

shotgun

Texas, US

None

lees than 2yo steer

93

18.0

corn-based

None

Doster E et al. (2018): Investigating Effects of Tulathromycin Metaphylaxis on the Fecal Resistome and Microbiome of Commercial Feedlot Cattle Early in the Feeding Period

SRR3181143

individual

shotgun

Texas, US

None

lees than 2yo steer

tulathromycin injection

93

18.0

corn-based

None

Doster E et al. (2018): Investigating Effects of Tulathromycin Metaphylaxis on the Fecal Resistome and Microbiome of Commercial Feedlot Cattle Early in the Feeding Period

SRR3181114

individual

shotgun

Texas, US

None

lees than 2yo steer

102

18.0

corn-based

None

Doster E et al. (2018): Investigating Effects of Tulathromycin Metaphylaxis on the Fecal Resistome and Microbiome of Commercial Feedlot Cattle Early in the Feeding Period

SRR3181144

individual

shotgun

Texas, US

None

lees than 2yo steer

tulathromycin injection

102

18.0

corn-based

None

Doster E et al. (2018): Investigating Effects of Tulathromycin Metaphylaxis on the Fecal Resistome and Microbiome of Commercial Feedlot Cattle Early in the Feeding Period

SRR3181115

individual

shotgun

Texas, US

None

lees than 2yo steer

103

18.0

corn-based

None

Doster E et al. (2018): Investigating Effects of Tulathromycin Metaphylaxis on the Fecal Resistome and Microbiome of Commercial Feedlot Cattle Early in the Feeding Period

SRR3181145

individual

shotgun

Texas, US

None

lees than 2yo steer

tulathromycin injection

103

18.0

corn-based

None

Doster E et al. (2018): Investigating Effects of Tulathromycin Metaphylaxis on the Fecal Resistome and Microbiome of Commercial Feedlot Cattle Early in the Feeding Period

SRR3181116

individual

shotgun

Texas, US

None

lees than 2yo steer

130

18.0

corn-based

None

Doster E et al. (2018): Investigating Effects of Tulathromycin Metaphylaxis on the Fecal Resistome and Microbiome of Commercial Feedlot Cattle Early in the Feeding Period

SRR3181146

individual

shotgun

Texas, US

None

lees than 2yo steer

tulathromycin injection

130

18.0

corn-based

None

Doster E et al. (2018): Investigating Effects of Tulathromycin Metaphylaxis on the Fecal Resistome and Microbiome of Commercial Feedlot Cattle Early in the Feeding Period

SRR3181117

individual

shotgun

Texas, US

None

lees than 2yo steer

155

18.0

corn-based

None

Doster E et al. (2018): Investigating Effects of Tulathromycin Metaphylaxis on the Fecal Resistome and Microbiome of Commercial Feedlot Cattle Early in the Feeding Period

SRR3181147

individual

shotgun

Texas, US

None

lees than 2yo steer

tulathromycin injection

155

18.0

corn-based

None

Doster E et al. (2018): Investigating Effects of Tulathromycin Metaphylaxis on the Fecal Resistome and Microbiome of Commercial Feedlot Cattle Early in the Feeding Period

SRR3181118

individual

shotgun

Texas, US

None

lees than 2yo steer

156

18.0

corn-based

None

Doster E et al. (2018): Investigating Effects of Tulathromycin Metaphylaxis on the Fecal Resistome and Microbiome of Commercial Feedlot Cattle Early in the Feeding Period

SRR3181148

individual

shotgun

Texas, US

None

lees than 2yo steer

tulathromycin injection

156

18.0

corn-based

None

Doster E et al. (2018): Investigating Effects of Tulathromycin Metaphylaxis on the Fecal Resistome and Microbiome of Commercial Feedlot Cattle Early in the Feeding Period

SRR3181119

individual

shotgun

Texas, US

None

lees than 2yo steer

158

18.0

corn-based

None

Doster E et al. (2018): Investigating Effects of Tulathromycin Metaphylaxis on the Fecal Resistome and Microbiome of Commercial Feedlot Cattle Early in the Feeding Period

SRR3181149

individual

shotgun

Texas, US

None

lees than 2yo steer

tulathromycin injection

158

18.0

corn-based

None

Doster E et al. (2018): Investigating Effects of Tulathromycin Metaphylaxis on the Fecal Resistome and Microbiome of Commercial Feedlot Cattle Early in the Feeding Period

SRR3181120

individual

shotgun

Texas, US

None

lees than 2yo steer

164

18.0

corn-based

None

Doster E et al. (2018): Investigating Effects of Tulathromycin Metaphylaxis on the Fecal Resistome and Microbiome of Commercial Feedlot Cattle Early in the Feeding Period

SRR3181150

individual

shotgun

Texas, US

None

lees than 2yo steer

tulathromycin injection

164

18.0

corn-based

None

Doster E et al. (2018): Investigating Effects of Tulathromycin Metaphylaxis on the Fecal Resistome and Microbiome of Commercial Feedlot Cattle Early in the Feeding Period

SRR3181121

individual

shotgun

Texas, US

None

lees than 2yo steer

208

18.0

corn-based

None

Doster E et al. (2018): Investigating Effects of Tulathromycin Metaphylaxis on the Fecal Resistome and Microbiome of Commercial Feedlot Cattle Early in the Feeding Period

SRR3181151

individual

shotgun

Texas, US

None

lees than 2yo steer

208

18.0

corn-based

None

Doster E et al. (2018): Investigating Effects of Tulathromycin Metaphylaxis on the Fecal Resistome and Microbiome of Commercial Feedlot Cattle Early in the Feeding Period

SRR3181122

individual

shotgun

Texas, US

None

lees than 2yo steer

216

18.0

corn-based

None

Doster E et al. (2018): Investigating Effects of Tulathromycin Metaphylaxis on the Fecal Resistome and Microbiome of Commercial Feedlot Cattle Early in the Feeding Period

SRR3181152

individual

shotgun

Texas, US

None

lees than 2yo steer

216

18.0

corn-based

None

Doster E et al. (2018): Investigating Effects of Tulathromycin Metaphylaxis on the Fecal Resistome and Microbiome of Commercial Feedlot Cattle Early in the Feeding Period

SRR3181123

individual

shotgun

Texas, US

None

lees than 2yo steer

220

18.0

corn-based

None

Doster E et al. (2018): Investigating Effects of Tulathromycin Metaphylaxis on the Fecal Resistome and Microbiome of Commercial Feedlot Cattle Early in the Feeding Period

SRR3181153

individual

shotgun

Texas, US

None

lees than 2yo steer

220

18.0

corn-based

None

Doster E et al. (2018): Investigating Effects of Tulathromycin Metaphylaxis on the Fecal Resistome and Microbiome of Commercial Feedlot Cattle Early in the Feeding Period

SRR3181124

individual

shotgun

Texas, US

None

lees than 2yo steer

227

18.0

corn-based

None

Doster E et al. (2018): Investigating Effects of Tulathromycin Metaphylaxis on the Fecal Resistome and Microbiome of Commercial Feedlot Cattle Early in the Feeding Period

SRR3181154

individual

shotgun

Texas, US

None

lees than 2yo steer

227

18.0

corn-based

None

Doster E et al. (2018): Investigating Effects of Tulathromycin Metaphylaxis on the Fecal Resistome and Microbiome of Commercial Feedlot Cattle Early in the Feeding Period

SRR3181125

individual

shotgun

Texas, US

None

lees than 2yo steer

228

18.0

corn-based

None

Doster E et al. (2018): Investigating Effects of Tulathromycin Metaphylaxis on the Fecal Resistome and Microbiome of Commercial Feedlot Cattle Early in the Feeding Period

SRR3181155

individual

shotgun

Texas, US

None

lees than 2yo steer

228

18.0

corn-based

None

Doster E et al. (2018): Investigating Effects of Tulathromycin Metaphylaxis on the Fecal Resistome and Microbiome of Commercial Feedlot Cattle Early in the Feeding Period

SRR3181126

individual

shotgun

Texas, US

None

lees than 2yo steer

261

18.0

corn-based

None

Doster E et al. (2018): Investigating Effects of Tulathromycin Metaphylaxis on the Fecal Resistome and Microbiome of Commercial Feedlot Cattle Early in the Feeding Period

SRR3181156

individual

shotgun

Texas, US

None

lees than 2yo steer

261

18.0

corn-based

None

Doster E et al. (2018): Investigating Effects of Tulathromycin Metaphylaxis on the Fecal Resistome and Microbiome of Commercial Feedlot Cattle Early in the Feeding Period

SRR3181127

individual

shotgun

Texas, US

None

lees than 2yo steer

281

18.0

corn-based

None

Doster E et al. (2018): Investigating Effects of Tulathromycin Metaphylaxis on the Fecal Resistome and Microbiome of Commercial Feedlot Cattle Early in the Feeding Period

SRR3181157

individual

shotgun

Texas, US

None

lees than 2yo steer

281

18.0

corn-based

None

Doster E et al. (2018): Investigating Effects of Tulathromycin Metaphylaxis on the Fecal Resistome and Microbiome of Commercial Feedlot Cattle Early in the Feeding Period

SRR3181128

individual

shotgun

Texas, US

None

lees than 2yo steer

285

18.0

corn-based

None

Doster E et al. (2018): Investigating Effects of Tulathromycin Metaphylaxis on the Fecal Resistome and Microbiome of Commercial Feedlot Cattle Early in the Feeding Period

SRR3181158

individual

shotgun

Texas, US

None

lees than 2yo steer

285

18.0

corn-based

None

Doster E et al. (2018): Investigating Effects of Tulathromycin Metaphylaxis on the Fecal Resistome and Microbiome of Commercial Feedlot Cattle Early in the Feeding Period

SRR3181129

individual

shotgun

Texas, US

None

lees than 2yo steer

286

18.0

corn-based

None

Doster E et al. (2018): Investigating Effects of Tulathromycin Metaphylaxis on the Fecal Resistome and Microbiome of Commercial Feedlot Cattle Early in the Feeding Period

SRR3181159

individual

shotgun

Texas, US

None

lees than 2yo steer

286

18.0

corn-based

None

Doster E et al. (2018): Investigating Effects of Tulathromycin Metaphylaxis on the Fecal Resistome and Microbiome of Commercial Feedlot Cattle Early in the Feeding Period

SRR3181130

individual

shotgun

Texas, US

None

lees than 2yo steer

287

18.0

corn-based

None

Doster E et al. (2018): Investigating Effects of Tulathromycin Metaphylaxis on the Fecal Resistome and Microbiome of Commercial Feedlot Cattle Early in the Feeding Period

SRR3181160

individual

shotgun

Texas, US

None

lees than 2yo steer

287

18.0

corn-based

None

Doster E et al. (2018): Investigating Effects of Tulathromycin Metaphylaxis on the Fecal Resistome and Microbiome of Commercial Feedlot Cattle Early in the Feeding Period

SRR3181131

individual

shotgun

Texas, US

None

lees than 2yo steer

289

18.0

corn-based

None

Doster E et al. (2018): Investigating Effects of Tulathromycin Metaphylaxis on the Fecal Resistome and Microbiome of Commercial Feedlot Cattle Early in the Feeding Period

SRR3181161

individual

shotgun

Texas, US

None

lees than 2yo steer

289

18.0

corn-based

None

Doster E et al. (2018): Investigating Effects of Tulathromycin Metaphylaxis on the Fecal Resistome and Microbiome of Commercial Feedlot Cattle Early in the Feeding Period

SRR3181132

individual

shotgun

Texas, US

None

lees than 2yo steer

298

18.0

corn-based

None

Doster E et al. (2018): Investigating Effects of Tulathromycin Metaphylaxis on the Fecal Resistome and Microbiome of Commercial Feedlot Cattle Early in the Feeding Period

SRR3181162

individual

shotgun

Texas, US

None

lees than 2yo steer

298

18.0

corn-based

None

Doster E et al. (2018): Investigating Effects of Tulathromycin Metaphylaxis on the Fecal Resistome and Microbiome of Commercial Feedlot Cattle Early in the Feeding Period

SRR3181133

individual

shotgun

Texas, US

None

lees than 2yo steer

349

18.0

corn-based

None

Doster E et al. (2018): Investigating Effects of Tulathromycin Metaphylaxis on the Fecal Resistome and Microbiome of Commercial Feedlot Cattle Early in the Feeding Period

SRR3181163

individual

shotgun

Texas, US

None

lees than 2yo steer

349

18.0

corn-based

None

Doster E et al. (2018): Investigating Effects of Tulathromycin Metaphylaxis on the Fecal Resistome and Microbiome of Commercial Feedlot Cattle Early in the Feeding Period

SRR3181134

individual

shotgun

Texas, US

None

lees than 2yo steer

372

18.0

corn-based

None

Doster E et al. (2018): Investigating Effects of Tulathromycin Metaphylaxis on the Fecal Resistome and Microbiome of Commercial Feedlot Cattle Early in the Feeding Period

SRR3181164

individual

shotgun

Texas, US

None

lees than 2yo steer

372

18.0

corn-based

None

Doster E et al. (2018): Investigating Effects of Tulathromycin Metaphylaxis on the Fecal Resistome and Microbiome of Commercial Feedlot Cattle Early in the Feeding Period

SRR3181135

individual

shotgun

Texas, US

None

lees than 2yo steer

376

18.0

corn-based

None

Doster E et al. (2018): Investigating Effects of Tulathromycin Metaphylaxis on the Fecal Resistome and Microbiome of Commercial Feedlot Cattle Early in the Feeding Period

SRR3181165

individual

shotgun

Texas, US

None

lees than 2yo steer

376

18.0

corn-based

None

Doster E et al. (2018): Investigating Effects of Tulathromycin Metaphylaxis on the Fecal Resistome and Microbiome of Commercial Feedlot Cattle Early in the Feeding Period

SRR12217750

individual

shotgun

Pennsylvania, US

A

None

veal

0.05

artificial-milk

None

Salaheen S et al. (2021): Metagenomic Analysis of the Microbial Communities and Resistomes of Veal Calf Feces

SRR12217749

individual

shotgun

Pennsylvania, US

A

None

veal

0.05

artificial-milk

None

Salaheen S et al. (2021): Metagenomic Analysis of the Microbial Communities and Resistomes of Veal Calf Feces

SRR12217738

individual

shotgun

Pennsylvania, US

A

None

veal

0.05

artificial-milk

None

Salaheen S et al. (2021): Metagenomic Analysis of the Microbial Communities and Resistomes of Veal Calf Feces

SRR12217733

individual

shotgun

Pennsylvania, US

B

None

veal

0.05

artificial-milk

None

Salaheen S et al. (2021): Metagenomic Analysis of the Microbial Communities and Resistomes of Veal Calf Feces

SRR12217732

individual

shotgun

Pennsylvania, US

B

None

veal

0.05

artificial-milk

None

Salaheen S et al. (2021): Metagenomic Analysis of the Microbial Communities and Resistomes of Veal Calf Feces

SRR12217731

individual

shotgun

Pennsylvania, US

B

None

veal

0.05

artificial-milk

None

Salaheen S et al. (2021): Metagenomic Analysis of the Microbial Communities and Resistomes of Veal Calf Feces

SRR12217730

individual

shotgun

Pennsylvania, US

H

None

veal

0.05

artificial-milk

None

Salaheen S et al. (2021): Metagenomic Analysis of the Microbial Communities and Resistomes of Veal Calf Feces

SRR12217729

individual

shotgun

Pennsylvania, US

H

None

veal

0.05

artificial-milk

None

Salaheen S et al. (2021): Metagenomic Analysis of the Microbial Communities and Resistomes of Veal Calf Feces

SRR12217728

individual

shotgun

Pennsylvania, US

H

None

veal

0.05

artificial-milk

None

Salaheen S et al. (2021): Metagenomic Analysis of the Microbial Communities and Resistomes of Veal Calf Feces

SRR12217727

individual

shotgun

Pennsylvania, US

M

None

veal

0.05

artificial-milk

None

Salaheen S et al. (2021): Metagenomic Analysis of the Microbial Communities and Resistomes of Veal Calf Feces

SRR12217748

individual

shotgun

Pennsylvania, US

M

None

veal

0.05

artificial-milk

None

Salaheen S et al. (2021): Metagenomic Analysis of the Microbial Communities and Resistomes of Veal Calf Feces

SRR12217747

individual

shotgun

Pennsylvania, US

M

None

veal

0.05

artificial-milk

None

Salaheen S et al. (2021): Metagenomic Analysis of the Microbial Communities and Resistomes of Veal Calf Feces

SRR12217746

individual

shotgun

Pennsylvania, US

A

None

veal

3.0

milk-solid

None

Salaheen S et al. (2021): Metagenomic Analysis of the Microbial Communities and Resistomes of Veal Calf Feces

SRR12217745

individual

shotgun

Pennsylvania, US

A

None

veal

3.0

milk-solid

None

Salaheen S et al. (2021): Metagenomic Analysis of the Microbial Communities and Resistomes of Veal Calf Feces

SRR12217744

individual

shotgun

Pennsylvania, US

A

None

veal

3.0

milk-solid

None

Salaheen S et al. (2021): Metagenomic Analysis of the Microbial Communities and Resistomes of Veal Calf Feces

SRR12217743

individual

shotgun

Pennsylvania, US

B

None

veal

3.0

milk-solid

None

Salaheen S et al. (2021): Metagenomic Analysis of the Microbial Communities and Resistomes of Veal Calf Feces

SRR12217742

individual

shotgun

Pennsylvania, US

B

None

veal

3.0

milk-solid

None

Salaheen S et al. (2021): Metagenomic Analysis of the Microbial Communities and Resistomes of Veal Calf Feces

SRR12217741

individual

shotgun

Pennsylvania, US

B

None

veal

3.0

milk-solid

None

Salaheen S et al. (2021): Metagenomic Analysis of the Microbial Communities and Resistomes of Veal Calf Feces

SRR12217740

individual

shotgun

Pennsylvania, US

H

None

veal

3.0

milk-solid

None

Salaheen S et al. (2021): Metagenomic Analysis of the Microbial Communities and Resistomes of Veal Calf Feces

SRR12217739

individual

shotgun

Pennsylvania, US

H

None

veal

3.0

milk-solid

None

Salaheen S et al. (2021): Metagenomic Analysis of the Microbial Communities and Resistomes of Veal Calf Feces

SRR12217737

individual

shotgun

Pennsylvania, US

H

None

veal

3.0

milk-solid

None

Salaheen S et al. (2021): Metagenomic Analysis of the Microbial Communities and Resistomes of Veal Calf Feces

SRR12217736

individual

shotgun

Pennsylvania, US

M

None

veal

3.0

milk-solid

None

Salaheen S et al. (2021): Metagenomic Analysis of the Microbial Communities and Resistomes of Veal Calf Feces

SRR12217735

individual

shotgun

Pennsylvania, US

M

None

veal

3.0

milk-solid

None

Salaheen S et al. (2021): Metagenomic Analysis of the Microbial Communities and Resistomes of Veal Calf Feces

SRR12217734

individual

shotgun

Pennsylvania, US

M

None

veal

3.0

milk-solid

None

Salaheen S et al. (2021): Metagenomic Analysis of the Microbial Communities and Resistomes of Veal Calf Feces

SRR6512906

composite

shotgun

canada,alberta

Feedlot A

None

antbtcs

multiple

None

Zaheer R et al. (2018): Impact of sequencing depth on the characterization of the microbiome and resistome

SRR6512894

composite

shotgun

canada,alberta

Feedlot A

None

antbtcs

multiple

None

Zaheer R et al. (2018): Impact of sequencing depth on the characterization of the microbiome and resistome

SRR6512891

composite

shotgun

canada,alberta

Feedlot A

None

antbtcs

multiple

None

Zaheer R et al. (2018): Impact of sequencing depth on the characterization of the microbiome and resistome

SRR6512905

composite

shotgun

canada,alberta

Feedlot A

None

antbtcs

multiple

None

Zaheer R et al. (2018): Impact of sequencing depth on the characterization of the microbiome and resistome

SRR6512893

composite

shotgun

canada,alberta

Feedlot A

None

antbtcs

multiple

None

Zaheer R et al. (2018): Impact of sequencing depth on the characterization of the microbiome and resistome

SRR6512892

composite

shotgun

canada,alberta

Feedlot A

None

antbtcs

multiple

None

Zaheer R et al. (2018): Impact of sequencing depth on the characterization of the microbiome and resistome

SRR6512912

composite

shotgun

canada,alberta

Feedlot C

None

antbtcs

multiple

None

Zaheer R et al. (2018): Impact of sequencing depth on the characterization of the microbiome and resistome

SRR6512904

composite

shotgun

canada,alberta

Feedlot C

None

antbtcs

multiple

None

Zaheer R et al. (2018): Impact of sequencing depth on the characterization of the microbiome and resistome

SRR6512896

composite

shotgun

canada,alberta

Feedlot C

None

antbtcs

multiple

None

Zaheer R et al. (2018): Impact of sequencing depth on the characterization of the microbiome and resistome

SRR6512911

composite

shotgun

canada,alberta

Feedlot C

None

antbtcs

multiple

None

Zaheer R et al. (2018): Impact of sequencing depth on the characterization of the microbiome and resistome

SRR6512903

composite

shotgun

canada,alberta

Feedlot C

None

antbtcs

multiple

None

Zaheer R et al. (2018): Impact of sequencing depth on the characterization of the microbiome and resistome

SRR6512895

composite

shotgun

canada,alberta

Feedlot C

None

antbtcs

multiple

None

Zaheer R et al. (2018): Impact of sequencing depth on the characterization of the microbiome and resistome

SRR6512910

composite

shotgun

canada,alberta

Feedlot B

None

antbtcs

multiple

None

Zaheer R et al. (2018): Impact of sequencing depth on the characterization of the microbiome and resistome

SRR6512898

composite

shotgun

canada,alberta

Feedlot B

None

antbtcs

multiple

None

Zaheer R et al. (2018): Impact of sequencing depth on the characterization of the microbiome and resistome

SRR6512902

composite

shotgun

canada,alberta

Feedlot B

None

antbtcs

multiple

None

Zaheer R et al. (2018): Impact of sequencing depth on the characterization of the microbiome and resistome

SRR6512909

composite

shotgun

canada,alberta

Feedlot B

None

antbtcs

multiple

None

Zaheer R et al. (2018): Impact of sequencing depth on the characterization of the microbiome and resistome

SRR6512897

composite

shotgun

canada,alberta

Feedlot B

None

antbtcs

multiple

None

Zaheer R et al. (2018): Impact of sequencing depth on the characterization of the microbiome and resistome

SRR6512901

composite

shotgun

canada,alberta

Feedlot B

None

antbtcs

multiple

None

Zaheer R et al. (2018): Impact of sequencing depth on the characterization of the microbiome and resistome

SRR9037497

composite

shotgun

canada,alberta

Feedlot D

None

no antibiotics

multiple

None

Zaheer R et al. (2018): Impact of sequencing depth on the characterization of the microbiome and resistome

SRR9037496

composite

shotgun

canada,alberta

Feedlot D

None

no antibiotics

multiple

None

Zaheer R et al. (2018): Impact of sequencing depth on the characterization of the microbiome and resistome

SRR6512908

composite

shotgun

canada,alberta

Feedlot D

None

antbtcs

multiple

None

Zaheer R et al. (2018): Impact of sequencing depth on the characterization of the microbiome and resistome

SRR6512900

composite

shotgun

canada,alberta

Feedlot D

None

antbtcs

multiple

None

Zaheer R et al. (2018): Impact of sequencing depth on the characterization of the microbiome and resistome

SRR6512889

composite

shotgun

canada,alberta

Feedlot D

None

antbtcs

multiple

None

Zaheer R et al. (2018): Impact of sequencing depth on the characterization of the microbiome and resistome

SRR9037495

composite

shotgun

canada,alberta

Feedlot D

None

no antibiotics

multiple

None

Zaheer R et al. (2018): Impact of sequencing depth on the characterization of the microbiome and resistome

SRR6512907

composite

shotgun

canada,alberta

Feedlot D

None

antbtcs

multiple

None

Zaheer R et al. (2018): Impact of sequencing depth on the characterization of the microbiome and resistome

SRR6512899

composite

shotgun

canada,alberta

Feedlot D

None

antbtcs

multiple

None

Zaheer R et al. (2018): Impact of sequencing depth on the characterization of the microbiome and resistome

SRR6512890

composite

shotgun

canada,alberta

Feedlot D

None

antbtcs

multiple

None

Zaheer R et al. (2018): Impact of sequencing depth on the characterization of the microbiome and resistome

SRR9037494

composite

shotgun

canada,alberta

Feedlot D

None

antbtcs

multiple

None

Zaheer R et al. (2018): Impact of sequencing depth on the characterization of the microbiome and resistome

ERR4398747

composite

shotgun

France

FR_veal_farm409

None

multiple

None

Duarte AS et al. (2021): Metagenomics-Based Approach to Source-Attribution of Antimicrobial Resistance Determinants – Identification of Reservoir Resistome Signatures

ERR4398748

composite

shotgun

France

FR_veal_farm410

None

multiple

None

Duarte AS et al. (2021): Metagenomics-Based Approach to Source-Attribution of Antimicrobial Resistance Determinants – Identification of Reservoir Resistome Signatures

ERR4398749

composite

shotgun

France

FR_veal_farm411

None

multiple

None

Duarte AS et al. (2021): Metagenomics-Based Approach to Source-Attribution of Antimicrobial Resistance Determinants – Identification of Reservoir Resistome Signatures

ERR4398750

composite

shotgun

France

FR_veal_farm412

None

multiple

None

Duarte AS et al. (2021): Metagenomics-Based Approach to Source-Attribution of Antimicrobial Resistance Determinants – Identification of Reservoir Resistome Signatures

ERR4398751

composite

shotgun

France

FR_veal_farm413

None

multiple

None

Duarte AS et al. (2021): Metagenomics-Based Approach to Source-Attribution of Antimicrobial Resistance Determinants – Identification of Reservoir Resistome Signatures

ERR4398752

composite

shotgun

France

FR_veal_farm414

None

multiple

None

Duarte AS et al. (2021): Metagenomics-Based Approach to Source-Attribution of Antimicrobial Resistance Determinants – Identification of Reservoir Resistome Signatures

ERR4398753

composite

shotgun

France

FR_veal_farm415

None

multiple

None

Duarte AS et al. (2021): Metagenomics-Based Approach to Source-Attribution of Antimicrobial Resistance Determinants – Identification of Reservoir Resistome Signatures

ERR4398754

composite

shotgun

France

FR_veal_farm416

None

multiple

None

Duarte AS et al. (2021): Metagenomics-Based Approach to Source-Attribution of Antimicrobial Resistance Determinants – Identification of Reservoir Resistome Signatures

ERR4398755

composite

shotgun

France

FR_veal_farm417

None

multiple

None

Duarte AS et al. (2021): Metagenomics-Based Approach to Source-Attribution of Antimicrobial Resistance Determinants – Identification of Reservoir Resistome Signatures

ERR4398756

composite

shotgun

France

FR_veal_farm418

None

multiple

None

Duarte AS et al. (2021): Metagenomics-Based Approach to Source-Attribution of Antimicrobial Resistance Determinants – Identification of Reservoir Resistome Signatures

ERR4398757

composite

shotgun

France

FR_veal_farm419

None

multiple

None

Duarte AS et al. (2021): Metagenomics-Based Approach to Source-Attribution of Antimicrobial Resistance Determinants – Identification of Reservoir Resistome Signatures

ERR4398758

composite

shotgun

France

FR_veal_farm420

None

multiple

None

Duarte AS et al. (2021): Metagenomics-Based Approach to Source-Attribution of Antimicrobial Resistance Determinants – Identification of Reservoir Resistome Signatures

ERR4398759

composite

shotgun

Germany

DE_veal_farm026

None

multiple

None

Duarte AS et al. (2021): Metagenomics-Based Approach to Source-Attribution of Antimicrobial Resistance Determinants – Identification of Reservoir Resistome Signatures

ERR4398760

composite

shotgun

Germany

DE_veal_farm023

None

multiple

None

Duarte AS et al. (2021): Metagenomics-Based Approach to Source-Attribution of Antimicrobial Resistance Determinants – Identification of Reservoir Resistome Signatures

ERR4398761

composite

shotgun

Germany

DE_veal_farm052

None

multiple

None

Duarte AS et al. (2021): Metagenomics-Based Approach to Source-Attribution of Antimicrobial Resistance Determinants – Identification of Reservoir Resistome Signatures

ERR4398762

composite

shotgun

Germany

DE_veal_farm020

None

multiple

None

Duarte AS et al. (2021): Metagenomics-Based Approach to Source-Attribution of Antimicrobial Resistance Determinants – Identification of Reservoir Resistome Signatures

ERR4398763

composite

shotgun

Germany

DE_veal_farm022

None

multiple

None

Duarte AS et al. (2021): Metagenomics-Based Approach to Source-Attribution of Antimicrobial Resistance Determinants – Identification of Reservoir Resistome Signatures

ERR4398764

composite

shotgun

Germany

DE_veal_farm024

None

multiple

None

Duarte AS et al. (2021): Metagenomics-Based Approach to Source-Attribution of Antimicrobial Resistance Determinants – Identification of Reservoir Resistome Signatures

ERR4398765

composite

shotgun

Germany

DE_veal_farm025

None

multiple

None

Duarte AS et al. (2021): Metagenomics-Based Approach to Source-Attribution of Antimicrobial Resistance Determinants – Identification of Reservoir Resistome Signatures

ERR4398766

composite

shotgun

Netherlands

NL_veal_farm101

None

multiple

None

Duarte AS et al. (2021): Metagenomics-Based Approach to Source-Attribution of Antimicrobial Resistance Determinants – Identification of Reservoir Resistome Signatures

ERR4398767

composite

shotgun

Netherlands

NL_veal_farm102

None

multiple

None

Duarte AS et al. (2021): Metagenomics-Based Approach to Source-Attribution of Antimicrobial Resistance Determinants – Identification of Reservoir Resistome Signatures

ERR4398768

composite

shotgun

Netherlands

NL_veal_farm103

None

multiple

None

Duarte AS et al. (2021): Metagenomics-Based Approach to Source-Attribution of Antimicrobial Resistance Determinants – Identification of Reservoir Resistome Signatures

ERR4398769

composite

shotgun

Netherlands

NL_veal_farm104

None

multiple

None

Duarte AS et al. (2021): Metagenomics-Based Approach to Source-Attribution of Antimicrobial Resistance Determinants – Identification of Reservoir Resistome Signatures

ERR4398770

composite

shotgun

Netherlands

NL_veal_farm105

None

multiple

None

Duarte AS et al. (2021): Metagenomics-Based Approach to Source-Attribution of Antimicrobial Resistance Determinants – Identification of Reservoir Resistome Signatures

ERR4398771

composite

shotgun

Netherlands

NL_veal_farm106

None

multiple

None

Duarte AS et al. (2021): Metagenomics-Based Approach to Source-Attribution of Antimicrobial Resistance Determinants – Identification of Reservoir Resistome Signatures

ERR4398772

composite

shotgun

Netherlands

NL_veal_farm107

None

multiple

None

Duarte AS et al. (2021): Metagenomics-Based Approach to Source-Attribution of Antimicrobial Resistance Determinants – Identification of Reservoir Resistome Signatures

ERR4398773

composite

shotgun

Netherlands

NL_veal_farm108

None

multiple

None

Duarte AS et al. (2021): Metagenomics-Based Approach to Source-Attribution of Antimicrobial Resistance Determinants – Identification of Reservoir Resistome Signatures

ERR4398774

composite

shotgun

Netherlands

NL_veal_farm109

None

multiple

None

Duarte AS et al. (2021): Metagenomics-Based Approach to Source-Attribution of Antimicrobial Resistance Determinants – Identification of Reservoir Resistome Signatures

ERR4398775

composite

shotgun

Netherlands

NL_veal_farm110

None

multiple

None

Duarte AS et al. (2021): Metagenomics-Based Approach to Source-Attribution of Antimicrobial Resistance Determinants – Identification of Reservoir Resistome Signatures

ERR4398776

composite

shotgun

Netherlands

NL_veal_farm111

None

multiple

None

Duarte AS et al. (2021): Metagenomics-Based Approach to Source-Attribution of Antimicrobial Resistance Determinants – Identification of Reservoir Resistome Signatures

ERR4398777

composite

shotgun

Netherlands

NL_veal_farm112

None

multiple

None

Duarte AS et al. (2021): Metagenomics-Based Approach to Source-Attribution of Antimicrobial Resistance Determinants – Identification of Reservoir Resistome Signatures

ERR4398778

composite

shotgun

Netherlands

NL_veal_farm113

None

multiple

None

Duarte AS et al. (2021): Metagenomics-Based Approach to Source-Attribution of Antimicrobial Resistance Determinants – Identification of Reservoir Resistome Signatures

ERR4398779

composite

shotgun

Netherlands

NL_veal_farm114

None

multiple

None

Duarte AS et al. (2021): Metagenomics-Based Approach to Source-Attribution of Antimicrobial Resistance Determinants – Identification of Reservoir Resistome Signatures

ERR4398787

composite

shotgun

Netherlands

NL_veal_farm100

None

multiple

None

Duarte AS et al. (2021): Metagenomics-Based Approach to Source-Attribution of Antimicrobial Resistance Determinants – Identification of Reservoir Resistome Signatures

ERR4398788

composite

shotgun

Netherlands

NL_veal_farm115

None

multiple

None

Duarte AS et al. (2021): Metagenomics-Based Approach to Source-Attribution of Antimicrobial Resistance Determinants – Identification of Reservoir Resistome Signatures

ERR4398789

composite

shotgun

Netherlands

NL_veal_farm116

None

multiple

None

Duarte AS et al. (2021): Metagenomics-Based Approach to Source-Attribution of Antimicrobial Resistance Determinants – Identification of Reservoir Resistome Signatures

ERR4398790

composite

shotgun

Netherlands

NL_veal_farm117

None

multiple

None

Duarte AS et al. (2021): Metagenomics-Based Approach to Source-Attribution of Antimicrobial Resistance Determinants – Identification of Reservoir Resistome Signatures

ERR4398791

composite

shotgun

Netherlands

NL_veal_farm118

None

multiple

None

Duarte AS et al. (2021): Metagenomics-Based Approach to Source-Attribution of Antimicrobial Resistance Determinants – Identification of Reservoir Resistome Signatures

ERR4398792

composite

shotgun

Netherlands

NL_veal_farm119

None

multiple

None

Duarte AS et al. (2021): Metagenomics-Based Approach to Source-Attribution of Antimicrobial Resistance Determinants – Identification of Reservoir Resistome Signatures

ERR4398793

composite

shotgun

Germany

DE_veal_farm021

None

multiple

None

Duarte AS et al. (2021): Metagenomics-Based Approach to Source-Attribution of Antimicrobial Resistance Determinants – Identification of Reservoir Resistome Signatures

ERR4398794

composite

shotgun

Germany

DE_veal_farm027

None

multiple

None

Duarte AS et al. (2021): Metagenomics-Based Approach to Source-Attribution of Antimicrobial Resistance Determinants – Identification of Reservoir Resistome Signatures

ERR4398795

composite

shotgun

Germany

DE_veal_farm028

None

multiple

None

Duarte AS et al. (2021): Metagenomics-Based Approach to Source-Attribution of Antimicrobial Resistance Determinants – Identification of Reservoir Resistome Signatures

ERR4398796

composite

shotgun

Germany

DE_veal_farm029

None

multiple

None

Duarte AS et al. (2021): Metagenomics-Based Approach to Source-Attribution of Antimicrobial Resistance Determinants – Identification of Reservoir Resistome Signatures

ERR4398797

composite

shotgun

Germany

DE_veal_farm030

None

multiple

None

Duarte AS et al. (2021): Metagenomics-Based Approach to Source-Attribution of Antimicrobial Resistance Determinants – Identification of Reservoir Resistome Signatures

ERR4398798

composite

shotgun

Germany

DE_veal_farm031

None

multiple

None

Duarte AS et al. (2021): Metagenomics-Based Approach to Source-Attribution of Antimicrobial Resistance Determinants – Identification of Reservoir Resistome Signatures

ERR4398799

composite

shotgun

Germany

DE_veal_farm033

None

multiple

None

Duarte AS et al. (2021): Metagenomics-Based Approach to Source-Attribution of Antimicrobial Resistance Determinants – Identification of Reservoir Resistome Signatures

ERR4398800

composite

shotgun

Germany

DE_veal_farm034

None

multiple

None

Duarte AS et al. (2021): Metagenomics-Based Approach to Source-Attribution of Antimicrobial Resistance Determinants – Identification of Reservoir Resistome Signatures

ERR4398801

composite

shotgun

Germany

DE_veal_farm035

None

multiple

None

Duarte AS et al. (2021): Metagenomics-Based Approach to Source-Attribution of Antimicrobial Resistance Determinants – Identification of Reservoir Resistome Signatures

ERR4398802

composite

shotgun

Germany

DE_veal_farm036

None

multiple

None

Duarte AS et al. (2021): Metagenomics-Based Approach to Source-Attribution of Antimicrobial Resistance Determinants – Identification of Reservoir Resistome Signatures

ERR4398803

composite

shotgun

Germany

DE_veal_farm037

None

multiple

None

Duarte AS et al. (2021): Metagenomics-Based Approach to Source-Attribution of Antimicrobial Resistance Determinants – Identification of Reservoir Resistome Signatures

ERR4398804

composite

shotgun

Germany

DE_veal_farm038

None

multiple

None

Duarte AS et al. (2021): Metagenomics-Based Approach to Source-Attribution of Antimicrobial Resistance Determinants – Identification of Reservoir Resistome Signatures

ERR4398805

composite

shotgun

Germany

DE_veal_farm039

None

multiple

None

Duarte AS et al. (2021): Metagenomics-Based Approach to Source-Attribution of Antimicrobial Resistance Determinants – Identification of Reservoir Resistome Signatures

ERR4398806

composite

shotgun

Germany

DE_veal_farm040

None

multiple

None

Duarte AS et al. (2021): Metagenomics-Based Approach to Source-Attribution of Antimicrobial Resistance Determinants – Identification of Reservoir Resistome Signatures

ERR4398807

composite

shotgun

Germany

DE_veal_farm105

None

multiple

None

Duarte AS et al. (2021): Metagenomics-Based Approach to Source-Attribution of Antimicrobial Resistance Determinants – Identification of Reservoir Resistome Signatures

ERR4398808

composite

shotgun

France

FR_veal_farm401

None

multiple

None

Duarte AS et al. (2021): Metagenomics-Based Approach to Source-Attribution of Antimicrobial Resistance Determinants – Identification of Reservoir Resistome Signatures

ERR4398809

composite

shotgun

France

FR_veal_farm402

None

multiple

None

Duarte AS et al. (2021): Metagenomics-Based Approach to Source-Attribution of Antimicrobial Resistance Determinants – Identification of Reservoir Resistome Signatures

ERR4398810

composite

shotgun

France

FR_veal_farm403

None

multiple

None

Duarte AS et al. (2021): Metagenomics-Based Approach to Source-Attribution of Antimicrobial Resistance Determinants – Identification of Reservoir Resistome Signatures

ERR4398811

composite

shotgun

France

FR_veal_farm404

None

multiple

None

Duarte AS et al. (2021): Metagenomics-Based Approach to Source-Attribution of Antimicrobial Resistance Determinants – Identification of Reservoir Resistome Signatures

ERR4398812

composite

shotgun

France

FR_veal_farm405

None

multiple

None

Duarte AS et al. (2021): Metagenomics-Based Approach to Source-Attribution of Antimicrobial Resistance Determinants – Identification of Reservoir Resistome Signatures

ERR4398813

composite

shotgun

France

FR_veal_farm406

None

multiple

None

Duarte AS et al. (2021): Metagenomics-Based Approach to Source-Attribution of Antimicrobial Resistance Determinants – Identification of Reservoir Resistome Signatures

ERR4398814

composite

shotgun

France

FR_veal_farm407

None

multiple

None

Duarte AS et al. (2021): Metagenomics-Based Approach to Source-Attribution of Antimicrobial Resistance Determinants – Identification of Reservoir Resistome Signatures

SRR3053164

feedlot

shotgun

USA,Colorado

A

None

multiple

None

Noyes NR et al. (2016): Resistome diversity in cattle and the environment decreases during beef production

SRR3053167

feedlot

shotgun

USA,Colorado

B

None

multiple

None

Noyes NR et al. (2016): Resistome diversity in cattle and the environment decreases during beef production

SRR3053163

feedlot

shotgun

USA,Colorado

C

None

multiple

None

Noyes NR et al. (2016): Resistome diversity in cattle and the environment decreases during beef production

SRR3053162

feedlot

shotgun

USA,Colorado

D

None

multiple

None

Noyes NR et al. (2016): Resistome diversity in cattle and the environment decreases during beef production

SRR3053169

feedlot

shotgun

USA,Texas

E

None

multiple

None

Noyes NR et al. (2016): Resistome diversity in cattle and the environment decreases during beef production

SRR3053176

feedlot

shotgun

USA,Texas

F

None

multiple

None

Noyes NR et al. (2016): Resistome diversity in cattle and the environment decreases during beef production

SRR3053180

feedlot

shotgun

USA,Texas

G

None

multiple

None

Noyes NR et al. (2016): Resistome diversity in cattle and the environment decreases during beef production

SRR3053138

feedlot

shotgun

USA,Texas

H

None

multiple

None

Noyes NR et al. (2016): Resistome diversity in cattle and the environment decreases during beef production

SRR3053181

feedlot

shotgun

USA,Colorado

A

None

multiple

None

Noyes NR et al. (2016): Resistome diversity in cattle and the environment decreases during beef production

SRR3053172

feedlot

shotgun

USA,Colorado

B

None

multiple

None

Noyes NR et al. (2016): Resistome diversity in cattle and the environment decreases during beef production

SRR3053213

feedlot

shotgun

USA,Colorado

C

None

multiple

None

Noyes NR et al. (2016): Resistome diversity in cattle and the environment decreases during beef production

SRR3053146

feedlot

shotgun

USA,Colorado

D

None

multiple

None

Noyes NR et al. (2016): Resistome diversity in cattle and the environment decreases during beef production

SRR3053145

feedlot

shotgun

USA,Texas

E

None

multiple

None

Noyes NR et al. (2016): Resistome diversity in cattle and the environment decreases during beef production

SRR3053209

feedlot

shotgun

USA,Texas

F

None

multiple

None

Noyes NR et al. (2016): Resistome diversity in cattle and the environment decreases during beef production

SRR3053147

feedlot

shotgun

USA,Texas

G

None

multiple

None

Noyes NR et al. (2016): Resistome diversity in cattle and the environment decreases during beef production

SRR3053217

feedlot

shotgun

USA,Texas

H

None

multiple

None

Noyes NR et al. (2016): Resistome diversity in cattle and the environment decreases during beef production

SRR3053207

holding pen

shotgun

USA,Colorado

A

None

multiple

None

Noyes NR et al. (2016): Resistome diversity in cattle and the environment decreases during beef production

SRR3053171

holding pen

shotgun

USA,Colorado

B

None

multiple

None

Noyes NR et al. (2016): Resistome diversity in cattle and the environment decreases during beef production

SRR3053208

holding pen

shotgun

USA,Colorado

C

None

multiple

None

Noyes NR et al. (2016): Resistome diversity in cattle and the environment decreases during beef production

SRR3053212

holding pen

shotgun

USA,Colorado

D

None

multiple

None

Noyes NR et al. (2016): Resistome diversity in cattle and the environment decreases during beef production

SRR3053215

holding pen

shotgun

USA,Texas

E

None

multiple

None

Noyes NR et al. (2016): Resistome diversity in cattle and the environment decreases during beef production

SRR3053211

holding pen

shotgun

USA,Texas

F

None

multiple

None

Noyes NR et al. (2016): Resistome diversity in cattle and the environment decreases during beef production

SRR3053210

holding pen

shotgun

USA,Texas

G

None

multiple

None

Noyes NR et al. (2016): Resistome diversity in cattle and the environment decreases during beef production

SRR3053216

holding pen

shotgun

USA,Texas

H

None

multiple

None

Noyes NR et al. (2016): Resistome diversity in cattle and the environment decreases during beef production

SRR5678934

Pen floor

shotgun

USA: Colorado

Conventional dairy farm

None

antibiotics

multiple

None

Rovira P et al. (2019): Characterization of the Microbial Resistome in Conventional and “Raised Without Antibiotics” Beef and Dairy Production Systems

SRR5678935

Pen floor

shotgun

USA: Colorado

Conventional dairy farm

None

antibiotics

multiple

None

Rovira P et al. (2019): Characterization of the Microbial Resistome in Conventional and “Raised Without Antibiotics” Beef and Dairy Production Systems

SRR5678937

Pen floor

shotgun

USA: Colorado

Conventional dairy farm

None

antibiotics

multiple

None

Rovira P et al. (2019): Characterization of the Microbial Resistome in Conventional and “Raised Without Antibiotics” Beef and Dairy Production Systems

SRR5679010

Pen floor

shotgun

USA: Colorado

Conventional dairy farm

None

antibiotics

multiple

None

Rovira P et al. (2019): Characterization of the Microbial Resistome in Conventional and “Raised Without Antibiotics” Beef and Dairy Production Systems

SRR5679022

Pen floor

shotgun

USA: Colorado

Conventional dairy farm

None

antibiotics

multiple

None

Rovira P et al. (2019): Characterization of the Microbial Resistome in Conventional and “Raised Without Antibiotics” Beef and Dairy Production Systems

SRR5679023

Pen floor

shotgun

USA: Colorado

Conventional dairy farm

None

antibiotics

multiple

None

Rovira P et al. (2019): Characterization of the Microbial Resistome in Conventional and “Raised Without Antibiotics” Beef and Dairy Production Systems

SRR5679024

Pen floor

shotgun

USA: Colorado

Conventional dairy farm

None

antibiotics

multiple

None

Rovira P et al. (2019): Characterization of the Microbial Resistome in Conventional and “Raised Without Antibiotics” Beef and Dairy Production Systems

SRR5679025

Pen floor

shotgun

USA: Colorado

Conventional dairy farm

None

antibiotics

multiple

None

Rovira P et al. (2019): Characterization of the Microbial Resistome in Conventional and “Raised Without Antibiotics” Beef and Dairy Production Systems

SRR5679026

Pen floor

shotgun

USA: Colorado

Conventional dairy farm

None

antibiotics

multiple

None

Rovira P et al. (2019): Characterization of the Microbial Resistome in Conventional and “Raised Without Antibiotics” Beef and Dairy Production Systems

SRR5679039

Pen floor

shotgun

USA: Colorado

Conventional dairy farm

None

antibiotics

multiple

None

Rovira P et al. (2019): Characterization of the Microbial Resistome in Conventional and “Raised Without Antibiotics” Beef and Dairy Production Systems

SRR5679040

Pen floor

shotgun

USA: Colorado

Conventional dairy farm

None

antibiotics

multiple

None

Rovira P et al. (2019): Characterization of the Microbial Resistome in Conventional and “Raised Without Antibiotics” Beef and Dairy Production Systems

SRR5679041

Pen floor

shotgun

USA: Colorado

Conventional dairy farm

None

antibiotics

multiple

None

Rovira P et al. (2019): Characterization of the Microbial Resistome in Conventional and “Raised Without Antibiotics” Beef and Dairy Production Systems

SRR5679042

Pen floor

shotgun

USA: Colorado

Conventional dairy farm

None

antibiotics

multiple

None

Rovira P et al. (2019): Characterization of the Microbial Resistome in Conventional and “Raised Without Antibiotics” Beef and Dairy Production Systems

SRR5679043

Pen floor

shotgun

USA: Colorado

Conventional dairy farm

None

antibiotics

multiple

None

Rovira P et al. (2019): Characterization of the Microbial Resistome in Conventional and “Raised Without Antibiotics” Beef and Dairy Production Systems

SRR5679044

Pen floor

shotgun

USA: Colorado

Conventional dairy farm

None

antibiotics

multiple

None

Rovira P et al. (2019): Characterization of the Microbial Resistome in Conventional and “Raised Without Antibiotics” Beef and Dairy Production Systems

SRR5679045

Pen floor

shotgun

USA: Colorado

Conventional dairy farm

None

antibiotics

multiple

None

Rovira P et al. (2019): Characterization of the Microbial Resistome in Conventional and “Raised Without Antibiotics” Beef and Dairy Production Systems

SRR5678926

Pen floor

shotgun

Canada:Alberta

Conventional Feedlot

None

antibiotics

multiple

None

Rovira P et al. (2019): Characterization of the Microbial Resistome in Conventional and “Raised Without Antibiotics” Beef and Dairy Production Systems

SRR5678929

Pen floor

shotgun

Canada:Alberta

Conventional Feedlot

None

antibiotics

multiple

None

Rovira P et al. (2019): Characterization of the Microbial Resistome in Conventional and “Raised Without Antibiotics” Beef and Dairy Production Systems

SRR5678930

Pen floor

shotgun

Canada:Alberta

Conventional Feedlot

None

antibiotics

multiple

None

Rovira P et al. (2019): Characterization of the Microbial Resistome in Conventional and “Raised Without Antibiotics” Beef and Dairy Production Systems

SRR5678931

Pen floor

shotgun

Canada:Alberta

Conventional Feedlot

None

antibiotics

multiple

None

Rovira P et al. (2019): Characterization of the Microbial Resistome in Conventional and “Raised Without Antibiotics” Beef and Dairy Production Systems

SRR5678932

Pen floor

shotgun

Canada:Alberta

Conventional Feedlot

None

antibiotics

multiple

None

Rovira P et al. (2019): Characterization of the Microbial Resistome in Conventional and “Raised Without Antibiotics” Beef and Dairy Production Systems

SRR5679017

Pen floor

shotgun

Canada:Alberta

Conventional Feedlot

None

antibiotics

multiple

None

Rovira P et al. (2019): Characterization of the Microbial Resistome in Conventional and “Raised Without Antibiotics” Beef and Dairy Production Systems

SRR5679018

Pen floor

shotgun

Canada:Alberta

Conventional Feedlot

None

antibiotics

multiple

None

Rovira P et al. (2019): Characterization of the Microbial Resistome in Conventional and “Raised Without Antibiotics” Beef and Dairy Production Systems

SRR5679019

Pen floor

shotgun

Canada:Alberta

Conventional Feedlot

None

antibiotics

multiple

None

Rovira P et al. (2019): Characterization of the Microbial Resistome in Conventional and “Raised Without Antibiotics” Beef and Dairy Production Systems

SRR5679020

Pen floor

shotgun

Canada:Alberta

Conventional Feedlot

None

antibiotics

multiple

None

Rovira P et al. (2019): Characterization of the Microbial Resistome in Conventional and “Raised Without Antibiotics” Beef and Dairy Production Systems

SRR5679021

Pen floor

shotgun

Canada:Alberta

Conventional Feedlot

None

antibiotics

multiple

None

Rovira P et al. (2019): Characterization of the Microbial Resistome in Conventional and “Raised Without Antibiotics” Beef and Dairy Production Systems

SRR5679033

Pen floor

shotgun

Canada:Alberta

Conventional Feedlot

None

antibiotics

multiple

None

Rovira P et al. (2019): Characterization of the Microbial Resistome in Conventional and “Raised Without Antibiotics” Beef and Dairy Production Systems

SRR5679034

Pen floor

shotgun

Canada:Alberta

Conventional Feedlot

None

antibiotics

multiple

None

Rovira P et al. (2019): Characterization of the Microbial Resistome in Conventional and “Raised Without Antibiotics” Beef and Dairy Production Systems

SRR5679035

Pen floor

shotgun

Canada:Alberta

Conventional Feedlot

None

antibiotics

multiple

None

Rovira P et al. (2019): Characterization of the Microbial Resistome in Conventional and “Raised Without Antibiotics” Beef and Dairy Production Systems

SRR5679036

Pen floor

shotgun

Canada:Alberta

Conventional Feedlot

None

antibiotics

multiple

None

Rovira P et al. (2019): Characterization of the Microbial Resistome in Conventional and “Raised Without Antibiotics” Beef and Dairy Production Systems

SRR5679037

Pen floor

shotgun

Canada:Alberta

Conventional Feedlot

None

antibiotics

multiple

None

Rovira P et al. (2019): Characterization of the Microbial Resistome in Conventional and “Raised Without Antibiotics” Beef and Dairy Production Systems

SRR5678982

Pen floor

shotgun

Canada:Alberta

Natural Feedlot

None

no antibiotics

multiple

None

Rovira P et al. (2019): Characterization of the Microbial Resistome in Conventional and “Raised Without Antibiotics” Beef and Dairy Production Systems

SRR5678983

Pen floor

shotgun

Canada:Alberta

Natural Feedlot

None

no antibiotics

multiple

None

Rovira P et al. (2019): Characterization of the Microbial Resistome in Conventional and “Raised Without Antibiotics” Beef and Dairy Production Systems

SRR5678984

Pen floor

shotgun

Canada:Alberta

Natural Feedlot

None

no antibiotics

multiple

None

Rovira P et al. (2019): Characterization of the Microbial Resistome in Conventional and “Raised Without Antibiotics” Beef and Dairy Production Systems

SRR5678985

Pen floor

shotgun

Canada:Alberta

Natural Feedlot

None

no antibiotics

multiple

None

Rovira P et al. (2019): Characterization of the Microbial Resistome in Conventional and “Raised Without Antibiotics” Beef and Dairy Production Systems

SRR5678986

Pen floor

shotgun

Canada:Alberta

Natural Feedlot

None

no antibiotics

multiple

None

Rovira P et al. (2019): Characterization of the Microbial Resistome in Conventional and “Raised Without Antibiotics” Beef and Dairy Production Systems

SRR5678987

Pen floor

shotgun

Canada:Alberta

Natural Feedlot

None

no antibiotics

multiple

None

Rovira P et al. (2019): Characterization of the Microbial Resistome in Conventional and “Raised Without Antibiotics” Beef and Dairy Production Systems

SRR5678988

Pen floor

shotgun

Canada:Alberta

Natural Feedlot

None

no antibiotics

multiple

None

Rovira P et al. (2019): Characterization of the Microbial Resistome in Conventional and “Raised Without Antibiotics” Beef and Dairy Production Systems

SRR5678989

Pen floor

shotgun

Canada:Alberta

Natural Feedlot

None

no antibiotics

multiple

None

Rovira P et al. (2019): Characterization of the Microbial Resistome in Conventional and “Raised Without Antibiotics” Beef and Dairy Production Systems

SRR5678990

Pen floor

shotgun

Canada:Alberta

Natural Feedlot

None

no antibiotics

multiple

None

Rovira P et al. (2019): Characterization of the Microbial Resistome in Conventional and “Raised Without Antibiotics” Beef and Dairy Production Systems

SRR5678991

Pen floor

shotgun

Canada:Alberta

Natural Feedlot

None

no antibiotics

multiple

None

Rovira P et al. (2019): Characterization of the Microbial Resistome in Conventional and “Raised Without Antibiotics” Beef and Dairy Production Systems

SRR5679001

Pen floor

shotgun

Canada:Alberta

Natural Feedlot

None

no antibiotics

multiple

None

Rovira P et al. (2019): Characterization of the Microbial Resistome in Conventional and “Raised Without Antibiotics” Beef and Dairy Production Systems

SRR5679005

Pen floor

shotgun

Canada:Alberta

Natural Feedlot

None

no antibiotics

multiple

None

Rovira P et al. (2019): Characterization of the Microbial Resistome in Conventional and “Raised Without Antibiotics” Beef and Dairy Production Systems

SRR5679006

Pen floor

shotgun

Canada:Alberta

Natural Feedlot

None

no antibiotics

multiple

None

Rovira P et al. (2019): Characterization of the Microbial Resistome in Conventional and “Raised Without Antibiotics” Beef and Dairy Production Systems

SRR5679007

Pen floor

shotgun

Canada:Alberta

Natural Feedlot

None

no antibiotics

multiple

None

Rovira P et al. (2019): Characterization of the Microbial Resistome in Conventional and “Raised Without Antibiotics” Beef and Dairy Production Systems

SRR5679008

Pen floor

shotgun

Canada:Alberta

Natural Feedlot

None

no antibiotics

multiple

None

Rovira P et al. (2019): Characterization of the Microbial Resistome in Conventional and “Raised Without Antibiotics” Beef and Dairy Production Systems

SRR5679009

Pen floor

shotgun

Canada:Alberta

Natural Feedlot

None

no antibiotics

multiple

None

Rovira P et al. (2019): Characterization of the Microbial Resistome in Conventional and “Raised Without Antibiotics” Beef and Dairy Production Systems

SRR5678979

Pen floor

shotgun

USA: Colorado

Organic dairy farm

None

no antibiotics

multiple

None

Rovira P et al. (2019): Characterization of the Microbial Resistome in Conventional and “Raised Without Antibiotics” Beef and Dairy Production Systems

SRR5678980

Pen floor

shotgun

USA: Colorado

Organic dairy farm

None

no antibiotics

multiple

None

Rovira P et al. (2019): Characterization of the Microbial Resistome in Conventional and “Raised Without Antibiotics” Beef and Dairy Production Systems

SRR5678981

Pen floor

shotgun

USA: Colorado

Organic dairy farm

None

no antibiotics

multiple

None

Rovira P et al. (2019): Characterization of the Microbial Resistome in Conventional and “Raised Without Antibiotics” Beef and Dairy Production Systems

SRR5678992

Pen floor

shotgun

USA: Colorado

Organic dairy farm

None

no antibiotics

multiple

None

Rovira P et al. (2019): Characterization of the Microbial Resistome in Conventional and “Raised Without Antibiotics” Beef and Dairy Production Systems

SRR5678993

Pen floor

shotgun

USA: Colorado

Organic dairy farm

None

no antibiotics

multiple

None

Rovira P et al. (2019): Characterization of the Microbial Resistome in Conventional and “Raised Without Antibiotics” Beef and Dairy Production Systems

SRR5678994

Pen floor

shotgun

USA: Colorado

Organic dairy farm

None

no antibiotics

multiple

None

Rovira P et al. (2019): Characterization of the Microbial Resistome in Conventional and “Raised Without Antibiotics” Beef and Dairy Production Systems

SRR5678995

Pen floor

shotgun

USA: Colorado

Organic dairy farm

None

no antibiotics

multiple

None

Rovira P et al. (2019): Characterization of the Microbial Resistome in Conventional and “Raised Without Antibiotics” Beef and Dairy Production Systems

SRR5678996

Pen floor

shotgun

USA: Colorado

Organic dairy farm

None

no antibiotics

multiple

None

Rovira P et al. (2019): Characterization of the Microbial Resistome in Conventional and “Raised Without Antibiotics” Beef and Dairy Production Systems

SRR5679011

Pen floor

shotgun

USA: Colorado

Organic dairy farm

None

no antibiotics

multiple

None

Rovira P et al. (2019): Characterization of the Microbial Resistome in Conventional and “Raised Without Antibiotics” Beef and Dairy Production Systems

SRR5679012

Pen floor

shotgun

USA: Colorado

Organic dairy farm

None

no antibiotics

multiple

None

Rovira P et al. (2019): Characterization of the Microbial Resistome in Conventional and “Raised Without Antibiotics” Beef and Dairy Production Systems

SRR5679013

Pen floor

shotgun

USA: Colorado

Organic dairy farm

None

no antibiotics

multiple

None

Rovira P et al. (2019): Characterization of the Microbial Resistome in Conventional and “Raised Without Antibiotics” Beef and Dairy Production Systems

SRR5679015

Pen floor

shotgun

USA: Colorado

Organic dairy farm

None

no antibiotics

multiple

None

Rovira P et al. (2019): Characterization of the Microbial Resistome in Conventional and “Raised Without Antibiotics” Beef and Dairy Production Systems

SRR5679016

Pen floor

shotgun

USA: Colorado

Organic dairy farm

None

no antibiotics

multiple

None

Rovira P et al. (2019): Characterization of the Microbial Resistome in Conventional and “Raised Without Antibiotics” Beef and Dairy Production Systems

SRR5679029

Pen floor

shotgun

USA: Colorado

Organic dairy farm

None

no antibiotics

multiple

None

Rovira P et al. (2019): Characterization of the Microbial Resistome in Conventional and “Raised Without Antibiotics” Beef and Dairy Production Systems

SRR5679030

Pen floor

shotgun

USA: Colorado

Organic dairy farm

None

no antibiotics

multiple

None

Rovira P et al. (2019): Characterization of the Microbial Resistome in Conventional and “Raised Without Antibiotics” Beef and Dairy Production Systems

SRR5679031

Pen floor

shotgun

USA: Colorado

Organic dairy farm

None

no antibiotics

multiple

None

Rovira P et al. (2019): Characterization of the Microbial Resistome in Conventional and “Raised Without Antibiotics” Beef and Dairy Production Systems

SRR10098302

composite

shotgun

Pennsylvania, US

multiple

None

calf

multiple

None

Bradd J. Haley et al. (2020): Differences in the Microbial Community and Resistome Structures of Feces from Preweaned Calves and Lactating Dairy Cows in Commercial Dairy Herds

SRR10098303

composite

shotgun

Pennsylvania, US

multiple

None

calf

multiple

None

Bradd J. Haley et al. (2020): Differences in the Microbial Community and Resistome Structures of Feces from Preweaned Calves and Lactating Dairy Cows in Commercial Dairy Herds

SRR10098304

composite

shotgun

Pennsylvania, US

multiple

None

calf

multiple

None

Bradd J. Haley et al. (2020): Differences in the Microbial Community and Resistome Structures of Feces from Preweaned Calves and Lactating Dairy Cows in Commercial Dairy Herds

SRR10098305

composite

shotgun

Pennsylvania, US

multiple

None

calf

multiple

None

Bradd J. Haley et al. (2020): Differences in the Microbial Community and Resistome Structures of Feces from Preweaned Calves and Lactating Dairy Cows in Commercial Dairy Herds

SRR10098307

composite

shotgun

Pennsylvania, US

multiple

None

calf

multiple

None

Bradd J. Haley et al. (2020): Differences in the Microbial Community and Resistome Structures of Feces from Preweaned Calves and Lactating Dairy Cows in Commercial Dairy Herds

SRR10098308

composite

shotgun

Pennsylvania, US

multiple

None

calf

multiple

None

Bradd J. Haley et al. (2020): Differences in the Microbial Community and Resistome Structures of Feces from Preweaned Calves and Lactating Dairy Cows in Commercial Dairy Herds

SRR10098309

composite

shotgun

Pennsylvania, US

multiple

None

calf

multiple

None

Bradd J. Haley et al. (2020): Differences in the Microbial Community and Resistome Structures of Feces from Preweaned Calves and Lactating Dairy Cows in Commercial Dairy Herds

SRR10098310

composite

shotgun

Pennsylvania, US

multiple

None

calf

multiple

None

Bradd J. Haley et al. (2020): Differences in the Microbial Community and Resistome Structures of Feces from Preweaned Calves and Lactating Dairy Cows in Commercial Dairy Herds

SRR10098311

composite

shotgun

Pennsylvania, US

multiple

None

calf

multiple

None

Bradd J. Haley et al. (2020): Differences in the Microbial Community and Resistome Structures of Feces from Preweaned Calves and Lactating Dairy Cows in Commercial Dairy Herds

SRR10098312

composite

shotgun

Pennsylvania, US

multiple

None

calf

multiple

None

Bradd J. Haley et al. (2020): Differences in the Microbial Community and Resistome Structures of Feces from Preweaned Calves and Lactating Dairy Cows in Commercial Dairy Herds

SRR10098313

composite

shotgun

Pennsylvania, US

multiple

None

calf

multiple

None

Bradd J. Haley et al. (2020): Differences in the Microbial Community and Resistome Structures of Feces from Preweaned Calves and Lactating Dairy Cows in Commercial Dairy Herds

SRR10098314

composite

shotgun

Pennsylvania, US

multiple

None

calf

multiple

None

Bradd J. Haley et al. (2020): Differences in the Microbial Community and Resistome Structures of Feces from Preweaned Calves and Lactating Dairy Cows in Commercial Dairy Herds

SRR10098315

composite

shotgun

Pennsylvania, US

multiple

None

calf

multiple

None

Bradd J. Haley et al. (2020): Differences in the Microbial Community and Resistome Structures of Feces from Preweaned Calves and Lactating Dairy Cows in Commercial Dairy Herds

SRR10098316

composite

shotgun

Pennsylvania, US

multiple

None

calf

multiple

None

Bradd J. Haley et al. (2020): Differences in the Microbial Community and Resistome Structures of Feces from Preweaned Calves and Lactating Dairy Cows in Commercial Dairy Herds

SRR10098318

composite

shotgun

Pennsylvania, US

multiple

None

calf

multiple

None

Bradd J. Haley et al. (2020): Differences in the Microbial Community and Resistome Structures of Feces from Preweaned Calves and Lactating Dairy Cows in Commercial Dairy Herds

SRR10098319

composite

shotgun

Pennsylvania, US

multiple

None

calf

multiple

None

Bradd J. Haley et al. (2020): Differences in the Microbial Community and Resistome Structures of Feces from Preweaned Calves and Lactating Dairy Cows in Commercial Dairy Herds

SRR10098320

composite

shotgun

Pennsylvania, US

multiple

None

calf

multiple

None

Bradd J. Haley et al. (2020): Differences in the Microbial Community and Resistome Structures of Feces from Preweaned Calves and Lactating Dairy Cows in Commercial Dairy Herds

SRR10098321

composite

shotgun

Pennsylvania, US

multiple

None

cow

multiple

None

Bradd J. Haley et al. (2020): Differences in the Microbial Community and Resistome Structures of Feces from Preweaned Calves and Lactating Dairy Cows in Commercial Dairy Herds

SRR10098322

composite

shotgun

Pennsylvania, US

multiple

None

cow

multiple

None

Bradd J. Haley et al. (2020): Differences in the Microbial Community and Resistome Structures of Feces from Preweaned Calves and Lactating Dairy Cows in Commercial Dairy Herds

SRR10098323

composite

shotgun

Pennsylvania, US

multiple

None

cow

multiple

None

Bradd J. Haley et al. (2020): Differences in the Microbial Community and Resistome Structures of Feces from Preweaned Calves and Lactating Dairy Cows in Commercial Dairy Herds

SRR10098324

composite

shotgun

Pennsylvania, US

multiple

None

cow

multiple

None

Bradd J. Haley et al. (2020): Differences in the Microbial Community and Resistome Structures of Feces from Preweaned Calves and Lactating Dairy Cows in Commercial Dairy Herds

SRR10098325

composite

shotgun

Pennsylvania, US

multiple

None

cow

multiple

None

Bradd J. Haley et al. (2020): Differences in the Microbial Community and Resistome Structures of Feces from Preweaned Calves and Lactating Dairy Cows in Commercial Dairy Herds

SRR10098326

composite

shotgun

Pennsylvania, US

multiple

None

cow

multiple

None

Bradd J. Haley et al. (2020): Differences in the Microbial Community and Resistome Structures of Feces from Preweaned Calves and Lactating Dairy Cows in Commercial Dairy Herds

SRR10098327

composite

shotgun

Pennsylvania, US

multiple

None

cow

multiple

None

Bradd J. Haley et al. (2020): Differences in the Microbial Community and Resistome Structures of Feces from Preweaned Calves and Lactating Dairy Cows in Commercial Dairy Herds

SRR10098296

composite

shotgun

Pennsylvania, US

multiple

None

cow

multiple

None

Bradd J. Haley et al. (2020): Differences in the Microbial Community and Resistome Structures of Feces from Preweaned Calves and Lactating Dairy Cows in Commercial Dairy Herds

SRR10098297

composite

shotgun

Pennsylvania, US

multiple

None

cow

multiple

None

Bradd J. Haley et al. (2020): Differences in the Microbial Community and Resistome Structures of Feces from Preweaned Calves and Lactating Dairy Cows in Commercial Dairy Herds

SRR10098298

composite

shotgun

Pennsylvania, US

multiple

None

cow

multiple

None

Bradd J. Haley et al. (2020): Differences in the Microbial Community and Resistome Structures of Feces from Preweaned Calves and Lactating Dairy Cows in Commercial Dairy Herds

SRR10098299

composite

shotgun

Pennsylvania, US

multiple

None

cow

multiple

None

Bradd J. Haley et al. (2020): Differences in the Microbial Community and Resistome Structures of Feces from Preweaned Calves and Lactating Dairy Cows in Commercial Dairy Herds

SRR10098300

composite

shotgun

Pennsylvania, US

multiple

None

cow

multiple

None

Bradd J. Haley et al. (2020): Differences in the Microbial Community and Resistome Structures of Feces from Preweaned Calves and Lactating Dairy Cows in Commercial Dairy Herds

SRR10098301

composite

shotgun

Pennsylvania, US

multiple

None

cow

multiple

None

Bradd J. Haley et al. (2020): Differences in the Microbial Community and Resistome Structures of Feces from Preweaned Calves and Lactating Dairy Cows in Commercial Dairy Herds

SRR10098306

composite

shotgun

Pennsylvania, US

multiple

None

cow

multiple

None

Bradd J. Haley et al. (2020): Differences in the Microbial Community and Resistome Structures of Feces from Preweaned Calves and Lactating Dairy Cows in Commercial Dairy Herds

SRR10098317

composite

shotgun

Pennsylvania, US

multiple

None

cow

multiple

None

Bradd J. Haley et al. (2020): Differences in the Microbial Community and Resistome Structures of Feces from Preweaned Calves and Lactating Dairy Cows in Commercial Dairy Herds

SRR10098328

composite

shotgun

Pennsylvania, US

multiple

None

cow

multiple

None

Bradd J. Haley et al. (2020): Differences in the Microbial Community and Resistome Structures of Feces from Preweaned Calves and Lactating Dairy Cows in Commercial Dairy Herds

SRR10098329

composite

shotgun

Pennsylvania, US

multiple

None

cow

multiple

None

Bradd J. Haley et al. (2020): Differences in the Microbial Community and Resistome Structures of Feces from Preweaned Calves and Lactating Dairy Cows in Commercial Dairy Herds

SRR9699912

composite

shotgun

California and Nevada, US

None

tylosin

multiple

None

Weinroth MD et al. (2019): Investigation of tylosin in feed of feedlot cattle and effects on liver abscess prevalence, and fecal and soil microbiomes and resistomes

SRR9699913

composite

shotgun

California and Nevada, US

None

tylosin

multiple

None

Weinroth MD et al. (2019): Investigation of tylosin in feed of feedlot cattle and effects on liver abscess prevalence, and fecal and soil microbiomes and resistomes

SRR9699914

composite

shotgun

California and Nevada, US

None

No

multiple

None

Weinroth MD et al. (2019): Investigation of tylosin in feed of feedlot cattle and effects on liver abscess prevalence, and fecal and soil microbiomes and resistomes

SRR9699915

composite

shotgun

California and Nevada, US

None

No

multiple

None

Weinroth MD et al. (2019): Investigation of tylosin in feed of feedlot cattle and effects on liver abscess prevalence, and fecal and soil microbiomes and resistomes

SRR9699916

composite

shotgun

Arizona, New Mexico and Texas, US

None

tylosin

multiple

None

Weinroth MD et al. (2019): Investigation of tylosin in feed of feedlot cattle and effects on liver abscess prevalence, and fecal and soil microbiomes and resistomes

SRR9699917

composite

shotgun

Arizona, New Mexico and Texas, US

None

tylosin

multiple

None

Weinroth MD et al. (2019): Investigation of tylosin in feed of feedlot cattle and effects on liver abscess prevalence, and fecal and soil microbiomes and resistomes

SRR9699865

composite

shotgun

Arizona, New Mexico and Texas, US

None

No

multiple

None

Weinroth MD et al. (2019): Investigation of tylosin in feed of feedlot cattle and effects on liver abscess prevalence, and fecal and soil microbiomes and resistomes

SRR9699867

composite

shotgun

Arizona, New Mexico and Texas, US

None

No

multiple

None

Weinroth MD et al. (2019): Investigation of tylosin in feed of feedlot cattle and effects on liver abscess prevalence, and fecal and soil microbiomes and resistomes

SRR9699910

composite

shotgun

Colorado, Montana, Utah, and Wyoming, US

None

No

multiple

None

Weinroth MD et al. (2019): Investigation of tylosin in feed of feedlot cattle and effects on liver abscess prevalence, and fecal and soil microbiomes and resistomes

SRR9699864

composite

shotgun

Colorado, Montana, Utah, and Wyoming, US

None

No

multiple

None

Weinroth MD et al. (2019): Investigation of tylosin in feed of feedlot cattle and effects on liver abscess prevalence, and fecal and soil microbiomes and resistomes

SRR9699866

composite

shotgun

Colorado, Montana, Utah, and Wyoming, US

None

tylosin

multiple

None

Weinroth MD et al. (2019): Investigation of tylosin in feed of feedlot cattle and effects on liver abscess prevalence, and fecal and soil microbiomes and resistomes

SRR9699869

composite

shotgun

Colorado, Montana, Utah, and Wyoming, US

None

tylosin

multiple

None

Weinroth MD et al. (2019): Investigation of tylosin in feed of feedlot cattle and effects on liver abscess prevalence, and fecal and soil microbiomes and resistomes

SRR9699868

composite

shotgun

Colorado, Montana, Utah, and Wyoming, US

None

No

multiple

None

Weinroth MD et al. (2019): Investigation of tylosin in feed of feedlot cattle and effects on liver abscess prevalence, and fecal and soil microbiomes and resistomes

SRR9699871

composite

shotgun

Colorado, Montana, Utah, and Wyoming, US

None

No

multiple

None

Weinroth MD et al. (2019): Investigation of tylosin in feed of feedlot cattle and effects on liver abscess prevalence, and fecal and soil microbiomes and resistomes

SRR9699870

composite

shotgun

Colorado, Montana, Utah, and Wyoming, US

None

tylosin

multiple

None

Weinroth MD et al. (2019): Investigation of tylosin in feed of feedlot cattle and effects on liver abscess prevalence, and fecal and soil microbiomes and resistomes

SRR9699911

composite

shotgun

Colorado, Montana, Utah, and Wyoming, US

None

tylosin

multiple

None

Weinroth MD et al. (2019): Investigation of tylosin in feed of feedlot cattle and effects on liver abscess prevalence, and fecal and soil microbiomes and resistomes

ERP003848

Feces

16S 454 GS FLX

Austria

None

Simmental

None

V1 to V4 (Bacteria: 8F, 926R)

35

6

None

Klein-Jöbstl D et al. (2014): Pyrosequencing reveals diverse fecal microbiota in Simmental calves during early development

ERP107029

Feces

16S Illumina MiSeq

United States

None

Holstein

None

V4 (Archaea/Bacteria: 515F, 806R)

96

48

None

Muñoz-Vargas L et al. (2018): Fecal microbiome of periparturient dairy cattle and associations with the onset of Salmonella shedding

SRP040473

Feces

16S 454 GS FLX

Canada

None

Crossbred

None

V1 to V3 (Bacteria: 8F, 534R)

22

None

Xu Y et al. (2014): Escherichia coli O157:H7 Super-Shedder and Non-Shedder Feedlot Steers Harbour Distinct Fecal Bacterial Communities

SRP047129

Duodenum, jejunum, cecum, colon, feces

16S 454 GS FLX

Canada

None

Crossbred Charolaise

None

V1 to V3 (Bacteria: 8F, 534R)

83

10

None

Zaheer R et al. (2017): Changes in bacterial community composition of Escherichia coli O157:H7 super-shedder cattle occur in the lower intestine

SRP055534

Feces

16S 454 GS Junior

Czech Republic

None

V3 to V4 (Bacteria: 347F, 803R)

35

36

None

Marija Kaevska et al. (2016): Faecal bacterial composition in dairy cows shedding Mycobacterium avium subsp. paratuberculosis in faeces in comparison with nonshedding cows

SRP056906

Feces

16S 454 GS FLX

New Zealand

None

Friesian, Jersey, Friesian _ Jersey

None

V4 to V6 (Bacteria: 451F, 1019R)

11

12

None

Young W et al. (2015): Transfer of intestinal bacterial components to mammary secretions in the cow

SRP068080

Feces

16S 454 GS Junior

South Korea

None

Dairy: breed N/A

None

V1 to V3 (Bacteria: 8F, 534R)

24

None

Hee-Jin Dong et al. (2016): The Fecal Microbial Communities of Dairy Cattle Shedding Shiga Toxin–Producing Escherichia coli or Campylobacter jejuni

SRP072014

Colon, Duodenum, Feces, Ileum, Jejunum, Rumen

16S Illumina MiSeq

United States

None

Holstein

None

V3 to V4 (Bacteria: 341F, 806R)

379

12

None

Yeoman CJ et al. (2018): Biogeographical Differences in the Influence of Maternal Microbial Sources on the Early Successional Development of the Bovine Neonatal Gastrointestinal tract

SRP073728

Rumen, feces

16S Illumina MiSeq

United States

None

Holstein

None

V4 (Bacteria: 515F, 806R); V6 to V8 (Archaea: Ar915F, Ar1386R)

716

15

None

Dill-McFarland KA et al. (2017): Microbial succession in the gastrointestinal tract of dairy cows from 2 weeks to first lactation

SRP082277

Feces

16S Illumina HiSeq 2500

China

None

Japanese x Red Angus x Quichuan

None

V4 (Archaea/Bacteria: 515F, 806R)

25

None

Shengyin Jiao et al. (2017): Effect of high-fat diet and growth stage on the diversity and composition of intestinal microbiota in healthy bovine livestock

SRP102317

Feces

16S Illumina MiSeq

Canada

None

Crossbred yearling feedlot steers

None

V1 to V3 (Bacteria: 8F, 534R)

9

10

None

Wang O et al. (2017): Interactions of the Hindgut Mucosa-Associated Microbiome with Its Host Regulate Shedding of Escherichia coli O157:H7 by Cattle

SRP116056

Colon, cecum, jejunum

16S Illumina MiSeq

Brazil

None

Holstein _ Gyr

None

V3 to V4 (Bacteria: 344F, 806R)

49

25

None

Dias J et al. (2018): Bacterial Community Dynamics across the Gastrointestinal Tracts of Dairy Calves during Preweaning Development

SRP128145

Feces

16S Illumina MiSeq

Canada

None

Angus _ Herford

None

V4 (Archaea/Bacteria: 515F, 806R)

252

36

None

Holman DB et al. (2019): Antibiotic treatment in feedlot cattle: a longitudinal study of the effect of oxytetracycline and tulathromycin on the fecal and nasopharyngeal microbiota

SRP128833

Feces

16S Illumina MiSeq

Finland

None

Ayrshire and Holstein

None

V3 to V4 (Bacteria: 344F, 806R)

31

52

None

Alipour MJ et al. (2018): The composition of the perinatal intestinal microbiota in cattle

SRS7821212

individual

shotgun

France, Saint-Gene-Champagnelle

Theix, INRAE

None

lactating cows

100069

120.0

grass(while grazing), corn silage, grass silage, hay, concentrate (Beet pulp: 30%, Wheat: 22.7%, Barley: 20%, Rapeseed meal: 15%, Non-GMO soybean meal: 7.9%, Cane molasses: 1.5%, Bi-calcium phosphorus: 1%, Trace elements vitamins: 0.9%, Dry magnesia: 0.5%, Salt: 0.5%)

None

():

SRS7821214

individual

shotgun

France, Saint-Gene-Champagnelle

Theix, INRAE

None

lactating cows

144636

72.0

grass(while grazing), corn silage, grass silage, hay, concentrate (Beet pulp: 30%, Wheat: 22.7%, Barley: 20%, Rapeseed meal: 15%, Non-GMO soybean meal: 7.9%, Cane molasses: 1.5%, Bi-calcium phosphorus: 1%, Trace elements vitamins: 0.9%, Dry magnesia: 0.5%, Salt: 0.5%)

None

():

SRS7821224

individual

shotgun

France, Saint-Gene-Champagnelle

Theix, INRAE

None

lactating cows

144888

72.0

grass(while grazing), corn silage, grass silage, hay, concentrate (Beet pulp: 30%, Wheat: 22.7%, Barley: 20%, Rapeseed meal: 15%, Non-GMO soybean meal: 7.9%, Cane molasses: 1.5%, Bi-calcium phosphorus: 1%, Trace elements vitamins: 0.9%, Dry magnesia: 0.5%, Salt: 0.5%)

None

():

SRS7821235

individual

shotgun

France, Saint-Gene-Champagnelle

Theix, INRAE

None

lactating cows

144900

72.0

grass(while grazing), corn silage, grass silage, hay, concentrate (Beet pulp: 30%, Wheat: 22.7%, Barley: 20%, Rapeseed meal: 15%, Non-GMO soybean meal: 7.9%, Cane molasses: 1.5%, Bi-calcium phosphorus: 1%, Trace elements vitamins: 0.9%, Dry magnesia: 0.5%, Salt: 0.5%)

None

():

SRS7821246

individual

shotgun

France, Saint-Gene-Champagnelle

Theix, INRAE

None

lactating cows

144910

72.0

grass(while grazing), corn silage, grass silage, hay, concentrate (Beet pulp: 30%, Wheat: 22.7%, Barley: 20%, Rapeseed meal: 15%, Non-GMO soybean meal: 7.9%, Cane molasses: 1.5%, Bi-calcium phosphorus: 1%, Trace elements vitamins: 0.9%, Dry magnesia: 0.5%, Salt: 0.5%)

None

():

SRS7821255

individual

shotgun

France, Saint-Gene-Champagnelle

Theix, INRAE

None

lactating cows

144918

72.0

grass(while grazing), corn silage, grass silage, hay, concentrate (Beet pulp: 30%, Wheat: 22.7%, Barley: 20%, Rapeseed meal: 15%, Non-GMO soybean meal: 7.9%, Cane molasses: 1.5%, Bi-calcium phosphorus: 1%, Trace elements vitamins: 0.9%, Dry magnesia: 0.5%, Salt: 0.5%)

None

():

SRS7821256

individual

shotgun

France, Saint-Gene-Champagnelle

Theix, INRAE

None

lactating cows

144923

72.0

grass(while grazing), corn silage, grass silage, hay, concentrate (Beet pulp: 30%, Wheat: 22.7%, Barley: 20%, Rapeseed meal: 15%, Non-GMO soybean meal: 7.9%, Cane molasses: 1.5%, Bi-calcium phosphorus: 1%, Trace elements vitamins: 0.9%, Dry magnesia: 0.5%, Salt: 0.5%)

None

():

SRS7821257

individual

shotgun

France, Saint-Gene-Champagnelle

Theix, INRAE

None

lactating cows

144929

72.0

grass(while grazing), corn silage, grass silage, hay, concentrate (Beet pulp: 30%, Wheat: 22.7%, Barley: 20%, Rapeseed meal: 15%, Non-GMO soybean meal: 7.9%, Cane molasses: 1.5%, Bi-calcium phosphorus: 1%, Trace elements vitamins: 0.9%, Dry magnesia: 0.5%, Salt: 0.5%)

None

():

SRS7821258

individual

shotgun

France, Saint-Gene-Champagnelle

Theix, INRAE

None

lactating cows

155432

60.0

grass(while grazing), corn silage, grass silage, hay, concentrate (Beet pulp: 30%, Wheat: 22.7%, Barley: 20%, Rapeseed meal: 15%, Non-GMO soybean meal: 7.9%, Cane molasses: 1.5%, Bi-calcium phosphorus: 1%, Trace elements vitamins: 0.9%, Dry magnesia: 0.5%, Salt: 0.5%)

None

():

SRS7821259

individual

shotgun

France, Saint-Gene-Champagnelle

Theix, INRAE

None

lactating cows

155444

60.0

grass(while grazing), corn silage, grass silage, hay, concentrate (Beet pulp: 30%, Wheat: 22.7%, Barley: 20%, Rapeseed meal: 15%, Non-GMO soybean meal: 7.9%, Cane molasses: 1.5%, Bi-calcium phosphorus: 1%, Trace elements vitamins: 0.9%, Dry magnesia: 0.5%, Salt: 0.5%)

None

():

SRS7821213

individual

shotgun

France, Saint-Gene-Champagnelle

Theix, INRAE

None

lactating cows

155455

60.0

grass(while grazing), corn silage, grass silage, hay, concentrate (Beet pulp: 30%, Wheat: 22.7%, Barley: 20%, Rapeseed meal: 15%, Non-GMO soybean meal: 7.9%, Cane molasses: 1.5%, Bi-calcium phosphorus: 1%, Trace elements vitamins: 0.9%, Dry magnesia: 0.5%, Salt: 0.5%)

None

():

SRS7821215

individual

shotgun

France, Saint-Gene-Champagnelle

Theix, INRAE

None

lactating cows

155458

60.0

grass(while grazing), corn silage, grass silage, hay, concentrate (Beet pulp: 30%, Wheat: 22.7%, Barley: 20%, Rapeseed meal: 15%, Non-GMO soybean meal: 7.9%, Cane molasses: 1.5%, Bi-calcium phosphorus: 1%, Trace elements vitamins: 0.9%, Dry magnesia: 0.5%, Salt: 0.5%)

None

():

SRS7821216

individual

shotgun

France, Saint-Gene-Champagnelle

Theix, INRAE

None

lactating cows

155461

60.0

grass(while grazing), corn silage, grass silage, hay, concentrate (Beet pulp: 30%, Wheat: 22.7%, Barley: 20%, Rapeseed meal: 15%, Non-GMO soybean meal: 7.9%, Cane molasses: 1.5%, Bi-calcium phosphorus: 1%, Trace elements vitamins: 0.9%, Dry magnesia: 0.5%, Salt: 0.5%)

None

():

SRS7821217

individual

shotgun

France, Saint-Gene-Champagnelle

Theix, INRAE

None

lactating cows

155464

60.0

grass(while grazing), corn silage, grass silage, hay, concentrate (Beet pulp: 30%, Wheat: 22.7%, Barley: 20%, Rapeseed meal: 15%, Non-GMO soybean meal: 7.9%, Cane molasses: 1.5%, Bi-calcium phosphorus: 1%, Trace elements vitamins: 0.9%, Dry magnesia: 0.5%, Salt: 0.5%)

None

():

SRS7821218

individual

shotgun

France, Saint-Gene-Champagnelle

Theix, INRAE

None

lactating cows

155626

60.0

grass(while grazing), corn silage, grass silage, hay, concentrate (Beet pulp: 30%, Wheat: 22.7%, Barley: 20%, Rapeseed meal: 15%, Non-GMO soybean meal: 7.9%, Cane molasses: 1.5%, Bi-calcium phosphorus: 1%, Trace elements vitamins: 0.9%, Dry magnesia: 0.5%, Salt: 0.5%)

None

():

SRS7821219

individual

shotgun

France, Saint-Gene-Champagnelle

Theix, INRAE

None

lactating cows

155677

60.0

grass(while grazing), corn silage, grass silage, hay, concentrate (Beet pulp: 30%, Wheat: 22.7%, Barley: 20%, Rapeseed meal: 15%, Non-GMO soybean meal: 7.9%, Cane molasses: 1.5%, Bi-calcium phosphorus: 1%, Trace elements vitamins: 0.9%, Dry magnesia: 0.5%, Salt: 0.5%)

None

():

SRS7821220

individual

shotgun

France, Saint-Gene-Champagnelle

Theix, INRAE

None

lactating cows

166547

48.0

grass(while grazing), corn silage, grass silage, hay, concentrate (Beet pulp: 30%, Wheat: 22.7%, Barley: 20%, Rapeseed meal: 15%, Non-GMO soybean meal: 7.9%, Cane molasses: 1.5%, Bi-calcium phosphorus: 1%, Trace elements vitamins: 0.9%, Dry magnesia: 0.5%, Salt: 0.5%)

None

():

SRS7821221

individual

shotgun

France, Saint-Gene-Champagnelle

Theix, INRAE

None

lactating cows

166578

48.0

grass(while grazing), corn silage, grass silage, hay, concentrate (Beet pulp: 30%, Wheat: 22.7%, Barley: 20%, Rapeseed meal: 15%, Non-GMO soybean meal: 7.9%, Cane molasses: 1.5%, Bi-calcium phosphorus: 1%, Trace elements vitamins: 0.9%, Dry magnesia: 0.5%, Salt: 0.5%)

None

():

SRS7821222

individual

shotgun

France, Saint-Gene-Champagnelle

Theix, INRAE

None

lactating cows

166552

48.0

grass(while grazing), corn silage, grass silage, hay, concentrate (Beet pulp: 30%, Wheat: 22.7%, Barley: 20%, Rapeseed meal: 15%, Non-GMO soybean meal: 7.9%, Cane molasses: 1.5%, Bi-calcium phosphorus: 1%, Trace elements vitamins: 0.9%, Dry magnesia: 0.5%, Salt: 0.5%)

None

():

SRS7821223

individual

shotgun

France, Saint-Gene-Champagnelle

Theix, INRAE

None

lactating cows

166554

48.0

grass(while grazing), corn silage, grass silage, hay, concentrate (Beet pulp: 30%, Wheat: 22.7%, Barley: 20%, Rapeseed meal: 15%, Non-GMO soybean meal: 7.9%, Cane molasses: 1.5%, Bi-calcium phosphorus: 1%, Trace elements vitamins: 0.9%, Dry magnesia: 0.5%, Salt: 0.5%)

None

():

SRS7821225

individual

shotgun

France, Saint-Gene-Champagnelle

Theix, INRAE

None

lactating cows

166556

48.0

grass(while grazing), corn silage, grass silage, hay, concentrate (Beet pulp: 30%, Wheat: 22.7%, Barley: 20%, Rapeseed meal: 15%, Non-GMO soybean meal: 7.9%, Cane molasses: 1.5%, Bi-calcium phosphorus: 1%, Trace elements vitamins: 0.9%, Dry magnesia: 0.5%, Salt: 0.5%)

None

():

SRS7821226

individual

shotgun

France, Saint-Gene-Champagnelle

Theix, INRAE

None

lactating cows

166560

48.0

grass(while grazing), corn silage, grass silage, hay, concentrate (Beet pulp: 30%, Wheat: 22.7%, Barley: 20%, Rapeseed meal: 15%, Non-GMO soybean meal: 7.9%, Cane molasses: 1.5%, Bi-calcium phosphorus: 1%, Trace elements vitamins: 0.9%, Dry magnesia: 0.5%, Salt: 0.5%)

None

():

SRS7821227

individual

shotgun

France, Saint-Gene-Champagnelle

Theix, INRAE

None

lactating cows

166570

48.0

grass(while grazing), corn silage, grass silage, hay, concentrate (Beet pulp: 30%, Wheat: 22.7%, Barley: 20%, Rapeseed meal: 15%, Non-GMO soybean meal: 7.9%, Cane molasses: 1.5%, Bi-calcium phosphorus: 1%, Trace elements vitamins: 0.9%, Dry magnesia: 0.5%, Salt: 0.5%)

None

():

SRS7821228

individual

shotgun

France, Saint-Gene-Champagnelle

Theix, INRAE

None

lactating cows

166574

48.0

grass(while grazing), corn silage, grass silage, hay, concentrate (Beet pulp: 30%, Wheat: 22.7%, Barley: 20%, Rapeseed meal: 15%, Non-GMO soybean meal: 7.9%, Cane molasses: 1.5%, Bi-calcium phosphorus: 1%, Trace elements vitamins: 0.9%, Dry magnesia: 0.5%, Salt: 0.5%)

None

():

SRS7821229

individual

shotgun

France, Saint-Gene-Champagnelle

Theix, INRAE

None

lactating cows

166549

48.0

grass(while grazing), corn silage, grass silage, hay, concentrate (Beet pulp: 30%, Wheat: 22.7%, Barley: 20%, Rapeseed meal: 15%, Non-GMO soybean meal: 7.9%, Cane molasses: 1.5%, Bi-calcium phosphorus: 1%, Trace elements vitamins: 0.9%, Dry magnesia: 0.5%, Salt: 0.5%)

None

():

SRS7821230

individual

shotgun

France, Saint-Gene-Champagnelle

Theix, INRAE

None

lactating cows

166583

48.0

grass(while grazing), corn silage, grass silage, hay, concentrate (Beet pulp: 30%, Wheat: 22.7%, Barley: 20%, Rapeseed meal: 15%, Non-GMO soybean meal: 7.9%, Cane molasses: 1.5%, Bi-calcium phosphorus: 1%, Trace elements vitamins: 0.9%, Dry magnesia: 0.5%, Salt: 0.5%)

None

():

SRS7821231

individual

shotgun

France, Saint-Gene-Champagnelle

Theix, INRAE

None

lactating cows

166639

48.0

grass(while grazing), corn silage, grass silage, hay, concentrate (Beet pulp: 30%, Wheat: 22.7%, Barley: 20%, Rapeseed meal: 15%, Non-GMO soybean meal: 7.9%, Cane molasses: 1.5%, Bi-calcium phosphorus: 1%, Trace elements vitamins: 0.9%, Dry magnesia: 0.5%, Salt: 0.5%)

None

():

SRS7821232

individual

shotgun

France, Saint-Gene-Champagnelle

Theix, INRAE

None

lactating cows

177603

36.0

grass(while grazing), corn silage, grass silage, hay, concentrate (Beet pulp: 30%, Wheat: 22.7%, Barley: 20%, Rapeseed meal: 15%, Non-GMO soybean meal: 7.9%, Cane molasses: 1.5%, Bi-calcium phosphorus: 1%, Trace elements vitamins: 0.9%, Dry magnesia: 0.5%, Salt: 0.5%)

None

():

SRS7821233

individual

shotgun

France, Saint-Gene-Champagnelle

Theix, INRAE

None

lactating cows

177611

36.0

grass(while grazing), corn silage, grass silage, hay, concentrate (Beet pulp: 30%, Wheat: 22.7%, Barley: 20%, Rapeseed meal: 15%, Non-GMO soybean meal: 7.9%, Cane molasses: 1.5%, Bi-calcium phosphorus: 1%, Trace elements vitamins: 0.9%, Dry magnesia: 0.5%, Salt: 0.5%)

None

():

SRS7821234

individual

shotgun

France, Saint-Gene-Champagnelle

Theix, INRAE

None

lactating cows

177615

36.0

grass(while grazing), corn silage, grass silage, hay, concentrate (Beet pulp: 30%, Wheat: 22.7%, Barley: 20%, Rapeseed meal: 15%, Non-GMO soybean meal: 7.9%, Cane molasses: 1.5%, Bi-calcium phosphorus: 1%, Trace elements vitamins: 0.9%, Dry magnesia: 0.5%, Salt: 0.5%)

None

():

SRS7821237

individual

shotgun

France, Saint-Gene-Champagnelle

Theix, INRAE

None

lactating cows

177630

36.0

grass(while grazing), corn silage, grass silage, hay, concentrate (Beet pulp: 30%, Wheat: 22.7%, Barley: 20%, Rapeseed meal: 15%, Non-GMO soybean meal: 7.9%, Cane molasses: 1.5%, Bi-calcium phosphorus: 1%, Trace elements vitamins: 0.9%, Dry magnesia: 0.5%, Salt: 0.5%)

None

():

SRS7821236

individual

shotgun

France, Saint-Gene-Champagnelle

Theix, INRAE

None

lactating cows

177642

36.0

grass(while grazing), corn silage, grass silage, hay, concentrate (Beet pulp: 30%, Wheat: 22.7%, Barley: 20%, Rapeseed meal: 15%, Non-GMO soybean meal: 7.9%, Cane molasses: 1.5%, Bi-calcium phosphorus: 1%, Trace elements vitamins: 0.9%, Dry magnesia: 0.5%, Salt: 0.5%)

None

():

SRS7821238

individual

shotgun

France, Saint-Gene-Champagnelle

Theix, INRAE

None

lactating cows

177646

36.0

grass(while grazing), corn silage, grass silage, hay, concentrate (Beet pulp: 30%, Wheat: 22.7%, Barley: 20%, Rapeseed meal: 15%, Non-GMO soybean meal: 7.9%, Cane molasses: 1.5%, Bi-calcium phosphorus: 1%, Trace elements vitamins: 0.9%, Dry magnesia: 0.5%, Salt: 0.5%)

None

():

SRS7821239

individual

shotgun

France, Saint-Gene-Champagnelle

Theix, INRAE

None

lactating cows

177650

36.0

grass(while grazing), corn silage, grass silage, hay, concentrate (Beet pulp: 30%, Wheat: 22.7%, Barley: 20%, Rapeseed meal: 15%, Non-GMO soybean meal: 7.9%, Cane molasses: 1.5%, Bi-calcium phosphorus: 1%, Trace elements vitamins: 0.9%, Dry magnesia: 0.5%, Salt: 0.5%)

None

():

SRS7821240

individual

shotgun

France, Saint-Gene-Champagnelle

Theix, INRAE

None

lactating cows

188053

24.0

grass(while grazing), corn silage, grass silage, hay, concentrate (Beet pulp: 30%, Wheat: 22.7%, Barley: 20%, Rapeseed meal: 15%, Non-GMO soybean meal: 7.9%, Cane molasses: 1.5%, Bi-calcium phosphorus: 1%, Trace elements vitamins: 0.9%, Dry magnesia: 0.5%, Salt: 0.5%)

None

():

SRS7821241

individual

shotgun

France, Saint-Gene-Champagnelle

Theix, INRAE

None

lactating cows

XX7653

36.0

grass(while grazing), corn silage, grass silage, hay, concentrate (Beet pulp: 30%, Wheat: 22.7%, Barley: 20%, Rapeseed meal: 15%, Non-GMO soybean meal: 7.9%, Cane molasses: 1.5%, Bi-calcium phosphorus: 1%, Trace elements vitamins: 0.9%, Dry magnesia: 0.5%, Salt: 0.5%)

None

():

SRS7821242

individual

shotgun

France, Saint-Gene-Champagnelle

Theix, INRAE

None

lactating cows

144911

72.0

grass(while grazing), corn silage, grass silage, hay, concentrate (Beet pulp: 30%, Wheat: 22.7%, Barley: 20%, Rapeseed meal: 15%, Non-GMO soybean meal: 7.9%, Cane molasses: 1.5%, Bi-calcium phosphorus: 1%, Trace elements vitamins: 0.9%, Dry magnesia: 0.5%, Salt: 0.5%)

None

():

SRS7821243

individual

shotgun

France, Saint-Gene-Champagnelle

Theix, INRAE

None

lactating cows

144940

72.0

grass(while grazing), corn silage, grass silage, hay, concentrate (Beet pulp: 30%, Wheat: 22.7%, Barley: 20%, Rapeseed meal: 15%, Non-GMO soybean meal: 7.9%, Cane molasses: 1.5%, Bi-calcium phosphorus: 1%, Trace elements vitamins: 0.9%, Dry magnesia: 0.5%, Salt: 0.5%)

None

():

SRS7821244

individual

shotgun

France, Saint-Gene-Champagnelle

Theix, INRAE

None

lactating cows

155434

60.0

grass(while grazing), corn silage, grass silage, hay, concentrate (Beet pulp: 30%, Wheat: 22.7%, Barley: 20%, Rapeseed meal: 15%, Non-GMO soybean meal: 7.9%, Cane molasses: 1.5%, Bi-calcium phosphorus: 1%, Trace elements vitamins: 0.9%, Dry magnesia: 0.5%, Salt: 0.5%)

None

():

SRS7821245

individual

shotgun

France, Saint-Gene-Champagnelle

Theix, INRAE

None

lactating cows

155459

60.0

grass(while grazing), corn silage, grass silage, hay, concentrate (Beet pulp: 30%, Wheat: 22.7%, Barley: 20%, Rapeseed meal: 15%, Non-GMO soybean meal: 7.9%, Cane molasses: 1.5%, Bi-calcium phosphorus: 1%, Trace elements vitamins: 0.9%, Dry magnesia: 0.5%, Salt: 0.5%)

None

():

SRS7821247

individual

shotgun

France, Saint-Gene-Champagnelle

Theix, INRAE

None

lactating cows

166543

48.0

grass(while grazing), corn silage, grass silage, hay, concentrate (Beet pulp: 30%, Wheat: 22.7%, Barley: 20%, Rapeseed meal: 15%, Non-GMO soybean meal: 7.9%, Cane molasses: 1.5%, Bi-calcium phosphorus: 1%, Trace elements vitamins: 0.9%, Dry magnesia: 0.5%, Salt: 0.5%)

None

():

SRS7821248

individual

shotgun

France, Saint-Gene-Champagnelle

Theix, INRAE

None

lactating cows

166545

48.0

grass(while grazing), corn silage, grass silage, hay, concentrate (Beet pulp: 30%, Wheat: 22.7%, Barley: 20%, Rapeseed meal: 15%, Non-GMO soybean meal: 7.9%, Cane molasses: 1.5%, Bi-calcium phosphorus: 1%, Trace elements vitamins: 0.9%, Dry magnesia: 0.5%, Salt: 0.5%)

None

():

SRS7821249

individual

shotgun

France, Saint-Gene-Champagnelle

Theix, INRAE

None

lactating cows

166565

48.0

grass(while grazing), corn silage, grass silage, hay, concentrate (Beet pulp: 30%, Wheat: 22.7%, Barley: 20%, Rapeseed meal: 15%, Non-GMO soybean meal: 7.9%, Cane molasses: 1.5%, Bi-calcium phosphorus: 1%, Trace elements vitamins: 0.9%, Dry magnesia: 0.5%, Salt: 0.5%)

None

():

SRS7821250

individual

shotgun

France, Saint-Gene-Champagnelle

Theix, INRAE

None

lactating cows

166588

48.0

grass(while grazing), corn silage, grass silage, hay, concentrate (Beet pulp: 30%, Wheat: 22.7%, Barley: 20%, Rapeseed meal: 15%, Non-GMO soybean meal: 7.9%, Cane molasses: 1.5%, Bi-calcium phosphorus: 1%, Trace elements vitamins: 0.9%, Dry magnesia: 0.5%, Salt: 0.5%)

None

():

SRS7821251

individual

shotgun

France, Saint-Gene-Champagnelle

Theix, INRAE

None

lactating cows

177616

36.0

grass(while grazing), corn silage, grass silage, hay, concentrate (Beet pulp: 30%, Wheat: 22.7%, Barley: 20%, Rapeseed meal: 15%, Non-GMO soybean meal: 7.9%, Cane molasses: 1.5%, Bi-calcium phosphorus: 1%, Trace elements vitamins: 0.9%, Dry magnesia: 0.5%, Salt: 0.5%)

None

():

SRS7821252

individual

shotgun

France, Saint-Gene-Champagnelle

Theix, INRAE

None

lactating cows

177618

36.0

grass(while grazing), corn silage, grass silage, hay, concentrate (Beet pulp: 30%, Wheat: 22.7%, Barley: 20%, Rapeseed meal: 15%, Non-GMO soybean meal: 7.9%, Cane molasses: 1.5%, Bi-calcium phosphorus: 1%, Trace elements vitamins: 0.9%, Dry magnesia: 0.5%, Salt: 0.5%)

None

():

SRS7821253

individual

shotgun

France, Saint-Gene-Champagnelle

Theix, INRAE

None

lactating cows

188066

24.0

grass(while grazing), corn silage, grass silage, hay, concentrate (Beet pulp: 30%, Wheat: 22.7%, Barley: 20%, Rapeseed meal: 15%, Non-GMO soybean meal: 7.9%, Cane molasses: 1.5%, Bi-calcium phosphorus: 1%, Trace elements vitamins: 0.9%, Dry magnesia: 0.5%, Salt: 0.5%)

None

():

SRS7821254

individual

shotgun

France, Saint-Gene-Champagnelle

Theix, INRAE

None

lactating cows

177654

36.0

grass(while grazing), corn silage, grass silage, hay, concentrate (Beet pulp: 30%, Wheat: 22.7%, Barley: 20%, Rapeseed meal: 15%, Non-GMO soybean meal: 7.9%, Cane molasses: 1.5%, Bi-calcium phosphorus: 1%, Trace elements vitamins: 0.9%, Dry magnesia: 0.5%, Salt: 0.5%)

None

():

SRS8213859

individual

shotgun

France, Saint-Gene-Champagnelle

Theix, INRAE

None

lactating cows

144888

72.0

corn silage, grass silage, hay, soybean meal, concentrate (Beet pulp: 30%, Wheat: 22.7%, Barley: 20%, Rapeseed meal: 15%, Non-GMO soybean meal: 7.9%, Cane molasses: 1.5%, Bi-calcium phosphorus: 1%, Trace elements vitamins: 0.9%, Dry magnesia: 0.5%, Salt: 0.5%)

None

():

SRS8213860

individual

shotgun

France, Saint-Gene-Champagnelle

Theix, INRAE

None

lactating cows

144900

72.0

corn silage, grass silage, hay, soybean meal, concentrate (Beet pulp: 30%, Wheat: 22.7%, Barley: 20%, Rapeseed meal: 15%, Non-GMO soybean meal: 7.9%, Cane molasses: 1.5%, Bi-calcium phosphorus: 1%, Trace elements vitamins: 0.9%, Dry magnesia: 0.5%, Salt: 0.5%)

None

():

SRS8213871

individual

shotgun

France, Saint-Gene-Champagnelle

Theix, INRAE

None

lactating cows

144910

72.0

corn silage, grass silage, hay, soybean meal, concentrate (Beet pulp: 30%, Wheat: 22.7%, Barley: 20%, Rapeseed meal: 15%, Non-GMO soybean meal: 7.9%, Cane molasses: 1.5%, Bi-calcium phosphorus: 1%, Trace elements vitamins: 0.9%, Dry magnesia: 0.5%, Salt: 0.5%)

None

():

SRS8213874

individual

shotgun

France, Saint-Gene-Champagnelle

Theix, INRAE

None

lactating cows

144923

72.0

corn silage, grass silage, hay, soybean meal, concentrate (Beet pulp: 30%, Wheat: 22.7%, Barley: 20%, Rapeseed meal: 15%, Non-GMO soybean meal: 7.9%, Cane molasses: 1.5%, Bi-calcium phosphorus: 1%, Trace elements vitamins: 0.9%, Dry magnesia: 0.5%, Salt: 0.5%)

None

():

SRS8213875

individual

shotgun

France, Saint-Gene-Champagnelle

Theix, INRAE

None

lactating cows

155455

60.0

corn silage, grass silage, hay, soybean meal, concentrate (Beet pulp: 30%, Wheat: 22.7%, Barley: 20%, Rapeseed meal: 15%, Non-GMO soybean meal: 7.9%, Cane molasses: 1.5%, Bi-calcium phosphorus: 1%, Trace elements vitamins: 0.9%, Dry magnesia: 0.5%, Salt: 0.5%)

None

():

SRS8213876

individual

shotgun

France, Saint-Gene-Champagnelle

Theix, INRAE

None

lactating cows

155459

60.0

corn silage, grass silage, hay, soybean meal, concentrate (Beet pulp: 30%, Wheat: 22.7%, Barley: 20%, Rapeseed meal: 15%, Non-GMO soybean meal: 7.9%, Cane molasses: 1.5%, Bi-calcium phosphorus: 1%, Trace elements vitamins: 0.9%, Dry magnesia: 0.5%, Salt: 0.5%)

None

():

SRS8213877

individual

shotgun

France, Saint-Gene-Champagnelle

Theix, INRAE

None

lactating cows

155626

60.0

corn silage, grass silage, hay, soybean meal, concentrate (Beet pulp: 30%, Wheat: 22.7%, Barley: 20%, Rapeseed meal: 15%, Non-GMO soybean meal: 7.9%, Cane molasses: 1.5%, Bi-calcium phosphorus: 1%, Trace elements vitamins: 0.9%, Dry magnesia: 0.5%, Salt: 0.5%)

None

():

SRS8213878

individual

shotgun

France, Saint-Gene-Champagnelle

Theix, INRAE

None

lactating cows

166543

48.0

corn silage, grass silage, hay, soybean meal, concentrate (Beet pulp: 30%, Wheat: 22.7%, Barley: 20%, Rapeseed meal: 15%, Non-GMO soybean meal: 7.9%, Cane molasses: 1.5%, Bi-calcium phosphorus: 1%, Trace elements vitamins: 0.9%, Dry magnesia: 0.5%, Salt: 0.5%)

None

():

SRS8213879

individual

shotgun

France, Saint-Gene-Champagnelle

Theix, INRAE

None

lactating cows

166560

48.0

corn silage, grass silage, hay, soybean meal, concentrate (Beet pulp: 30%, Wheat: 22.7%, Barley: 20%, Rapeseed meal: 15%, Non-GMO soybean meal: 7.9%, Cane molasses: 1.5%, Bi-calcium phosphorus: 1%, Trace elements vitamins: 0.9%, Dry magnesia: 0.5%, Salt: 0.5%)

None

():

SRS8213880

individual

shotgun

France, Saint-Gene-Champagnelle

Theix, INRAE

None

lactating cows

166565

48.0

corn silage, grass silage, hay, soybean meal, concentrate (Beet pulp: 30%, Wheat: 22.7%, Barley: 20%, Rapeseed meal: 15%, Non-GMO soybean meal: 7.9%, Cane molasses: 1.5%, Bi-calcium phosphorus: 1%, Trace elements vitamins: 0.9%, Dry magnesia: 0.5%, Salt: 0.5%)

None

():

SRS8213861

individual

shotgun

France, Saint-Gene-Champagnelle

Theix, INRAE

None

lactating cows

166570

48.0

corn silage, grass silage, hay, soybean meal, concentrate (Beet pulp: 30%, Wheat: 22.7%, Barley: 20%, Rapeseed meal: 15%, Non-GMO soybean meal: 7.9%, Cane molasses: 1.5%, Bi-calcium phosphorus: 1%, Trace elements vitamins: 0.9%, Dry magnesia: 0.5%, Salt: 0.5%)

None

():

SRS8213862

individual

shotgun

France, Saint-Gene-Champagnelle

Theix, INRAE

None

lactating cows

166574

48.0

corn silage, grass silage, hay, soybean meal, concentrate (Beet pulp: 30%, Wheat: 22.7%, Barley: 20%, Rapeseed meal: 15%, Non-GMO soybean meal: 7.9%, Cane molasses: 1.5%, Bi-calcium phosphorus: 1%, Trace elements vitamins: 0.9%, Dry magnesia: 0.5%, Salt: 0.5%)

None

():

SRS8213863

individual

shotgun

France, Saint-Gene-Champagnelle

Theix, INRAE

None

lactating cows

166583

48.0

corn silage, grass silage, hay, soybean meal, concentrate (Beet pulp: 30%, Wheat: 22.7%, Barley: 20%, Rapeseed meal: 15%, Non-GMO soybean meal: 7.9%, Cane molasses: 1.5%, Bi-calcium phosphorus: 1%, Trace elements vitamins: 0.9%, Dry magnesia: 0.5%, Salt: 0.5%)

None

():

SRS8213864

individual

shotgun

France, Saint-Gene-Champagnelle

Theix, INRAE

None

lactating cows

166639

48.0

corn silage, grass silage, hay, soybean meal, concentrate (Beet pulp: 30%, Wheat: 22.7%, Barley: 20%, Rapeseed meal: 15%, Non-GMO soybean meal: 7.9%, Cane molasses: 1.5%, Bi-calcium phosphorus: 1%, Trace elements vitamins: 0.9%, Dry magnesia: 0.5%, Salt: 0.5%)

None

():

SRS8213865

individual

shotgun

France, Saint-Gene-Champagnelle

Theix, INRAE

None

lactating cows

177603

36.0

corn silage, grass silage, hay, soybean meal, concentrate (Beet pulp: 30%, Wheat: 22.7%, Barley: 20%, Rapeseed meal: 15%, Non-GMO soybean meal: 7.9%, Cane molasses: 1.5%, Bi-calcium phosphorus: 1%, Trace elements vitamins: 0.9%, Dry magnesia: 0.5%, Salt: 0.5%)

None

():

SRS8213866

individual

shotgun

France, Saint-Gene-Champagnelle

Theix, INRAE

None

lactating cows

177611

36.0

corn silage, grass silage, hay, soybean meal, concentrate (Beet pulp: 30%, Wheat: 22.7%, Barley: 20%, Rapeseed meal: 15%, Non-GMO soybean meal: 7.9%, Cane molasses: 1.5%, Bi-calcium phosphorus: 1%, Trace elements vitamins: 0.9%, Dry magnesia: 0.5%, Salt: 0.5%)

None

():

SRS8213867

individual

shotgun

France, Saint-Gene-Champagnelle

Theix, INRAE

None

lactating cows

166552

48.0

corn silage, grass silage, hay, soybean meal, concentrate (Beet pulp: 30%, Wheat: 22.7%, Barley: 20%, Rapeseed meal: 15%, Non-GMO soybean meal: 7.9%, Cane molasses: 1.5%, Bi-calcium phosphorus: 1%, Trace elements vitamins: 0.9%, Dry magnesia: 0.5%, Salt: 0.5%)

None

():

SRS8213868

individual

shotgun

France, Saint-Gene-Champagnelle

Theix, INRAE

None

lactating cows

177618

36.0

corn silage, grass silage, hay, soybean meal, concentrate (Beet pulp: 30%, Wheat: 22.7%, Barley: 20%, Rapeseed meal: 15%, Non-GMO soybean meal: 7.9%, Cane molasses: 1.5%, Bi-calcium phosphorus: 1%, Trace elements vitamins: 0.9%, Dry magnesia: 0.5%, Salt: 0.5%)

None

():

SRS8213869

individual

shotgun

France, Saint-Gene-Champagnelle

Theix, INRAE

None

lactating cows

177642

36.0

corn silage, grass silage, hay, soybean meal, concentrate (Beet pulp: 30%, Wheat: 22.7%, Barley: 20%, Rapeseed meal: 15%, Non-GMO soybean meal: 7.9%, Cane molasses: 1.5%, Bi-calcium phosphorus: 1%, Trace elements vitamins: 0.9%, Dry magnesia: 0.5%, Salt: 0.5%)

None

():

SRS8213870

individual

shotgun

France, Saint-Gene-Champagnelle

Theix, INRAE

None

lactating cows

177650

36.0

corn silage, grass silage, hay, soybean meal, concentrate (Beet pulp: 30%, Wheat: 22.7%, Barley: 20%, Rapeseed meal: 15%, Non-GMO soybean meal: 7.9%, Cane molasses: 1.5%, Bi-calcium phosphorus: 1%, Trace elements vitamins: 0.9%, Dry magnesia: 0.5%, Salt: 0.5%)

None

():

SRS8213872

individual

shotgun

France, Saint-Gene-Champagnelle

Theix, INRAE

None

lactating cows

XX7653

36.0

corn silage, grass silage, hay, soybean meal, concentrate (Beet pulp: 30%, Wheat: 22.7%, Barley: 20%, Rapeseed meal: 15%, Non-GMO soybean meal: 7.9%, Cane molasses: 1.5%, Bi-calcium phosphorus: 1%, Trace elements vitamins: 0.9%, Dry magnesia: 0.5%, Salt: 0.5%)

None

():

SRS8213873

individual

shotgun

France, Saint-Gene-Champagnelle

Theix, INRAE

None

lactating cows

188066

24.0

corn silage, grass silage, hay, soybean meal, concentrate (Beet pulp: 30%, Wheat: 22.7%, Barley: 20%, Rapeseed meal: 15%, Non-GMO soybean meal: 7.9%, Cane molasses: 1.5%, Bi-calcium phosphorus: 1%, Trace elements vitamins: 0.9%, Dry magnesia: 0.5%, Salt: 0.5%)

None

():

Sequencing data